Allobranchiibius sp. GilTou73: LVQ62_04630
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Entry
LVQ62_04630 CDS
T07800
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
alx
Allobranchiibius sp. GilTou73
Pathway
alx00521
Streptomycin biosynthesis
alx00523
Polyketide sugar unit biosynthesis
alx00541
O-Antigen nucleotide sugar biosynthesis
alx01100
Metabolic pathways
alx01110
Biosynthesis of secondary metabolites
alx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LVQ62_04630 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVQ62_04630 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVQ62_04630 (rfbC)
Enzymes [BR:
alx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LVQ62_04630 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UIJ35674
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Position
complement(929716..930270)
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AA seq
184 aa
AA seq
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MTSFDLPGPVLFTPEPHFDARGFFTRTFDAQIAAEHGLDPAAFIQDSQSRSSRGVIRGMH
GRSGAGEGKLVRCAHGAILDVLVDIRTGSAAFGEQVSVRLDDETFAHLYVPPGFLHGFQV
LGEVADVCYRIDRAHDPSEDLAVRYDDPDLAIDWPVPVGTMSERDLSAGTFAELQILLKT
RERD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtccttcgatctgcccggcccggtgctcttcacacccgagccgcacttcgacgcg
cgcggcttcttcacccgcaccttcgacgcccagatcgcggccgagcacggactggacccg
gcagcgttcatccaggactcccagtcgcgctcgtcgcgcggcgtcatccgcggcatgcac
ggccgctccggcgccggggagggcaagctggtgcgctgcgcacacggcgcgatcctcgac
gtactggtcgacatccgcaccggttcggccgccttcggagagcaggtcagcgtccgcctg
gacgacgagaccttcgcccacctctacgtcccgccaggtttcctgcacggcttccaggtc
ctcggcgaggtggccgacgtctgctaccgcatcgaccgcgcacacgacccgagcgaggac
ctggcggtccgctacgacgacccggacctggcgatcgactggccggtgccggtcggcacg
atgagcgagcgcgacctgtccgcagggaccttcgcggagctgcagatcctgctcaagaca
cgcgaacgagactga
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