Arabidopsis lyrata (lyrate rockcress): 110228282
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Entry
110228282 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein PFB0765w
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1216
Motif
Other DBs
NCBI-GeneID:
110228282
NCBI-ProteinID:
XP_020880749
LinkDB
All DBs
Position
Unknown
AA seq
2054 aa
AA seq
DB search
MRKVSLLFFCCIVATSLSLNVVLAHEMVVNPPNTIKDIEPYISNRALGFVLKLENNCPIR
EQLRSFFDKLKDLLKLESSVTPLIEDNEPKTFKFDLKSKSENLLQTMFMIGKGLLSSSVR
KEMFEVMKSLTELHAAIGRVIIEKHIKGDESMSLSLEQKNAVENSISEWEQTITRIVKIV
VEVKSKSSSEASWKESSTTEHNNVSMNGNMVATNGENSESTQEKLDGVKGSNGGDVSMET
QEGNKVDDLKEGNTVFENGETKEINGENAESNNEKAVEGQGESIGDSAIDKNLESKEDVK
SEVEDKSDGSSMTENLEEVQRNNGVSTKDTNLENKGSEVESKDDKMVNATTNDEDNTKEN
REGTQENNGESLKDENLENKGSEGESKDDKMVNATTNDADHTKENKEETQENNGESLKDE
NLENNAGNNELKGNGSVEAKTNNEISMEAKREETQRSNEVYMNKETTKGENADFNKEKES
NIQGESIGDSTKGNILEDKEDVKPEVDSNVSDGSSTKERHQEAQGNDKVSTKDKNLDNIG
ADEERKYDKSVKVMTNDEGHTKEMREETQGNNGESVKNENLENKENKKELKDDGSVDEKT
NNESSLEEKGEQTQRGHDNSVNSKLVENKGGNAYSNKEKKVHVGDSTNDNNIESKAKSEA
EVKKNDGSSMKEKGDEVQGNNIESMEDKNLENKESHTDLKDEKSIADKQNVRTTMKDKQE
ESQINVGESKDDKSVEAKGNTKESKDDKSVEAKGNTKESKESKWTKTNENKVRNKEENVH
QGNKNESKKVEKGENKESKDAKLVEAKETKKLSRKENREEDNGGSGENIKEDKKXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKADRSVEVKSNQGKNPXRKSVKKFQRNN
RGSTKIKTKKTTKEDRDSANNMDIDVQKGSGESVKYKKDGKKEGNKEEKKDTINTNSKKK
EKDKKKKKGSQNNSKLKKKEEDRKEKEEYVNNELKKKEDNKKKMKESESSNLKEKNKDNK
EKKDSGDSKSKNRKEKKYEDNKSKRKEEDKNEKNKSEDKKREEKDSEDRKSKKAKEKKQE
KEESKDLKGKKKENEKMEKKELENHKSKKKEKNVENKKEHEDNKSMKKEEDKKRKKEHED
NKSRTKEEDKKDIGKLEDHKSNENKEEHEDKISKKNIEEKKKKKKFQHGKSMKKESDKKK
KKEKEEKNETKEIENSKSQNNEVDKKGKKSSKDQQKKKEKETKESEEKYPKKNEEDRKKQ
TSVEEHKSKTTGENKKQKETEEAKNKSKEDKKNTKTQSGGTNQVGNQSETENSMKRKEDK
KESKDSDSKEANNQQKSHGQEKKVGVQVNSEKDTKKTKEDVNVSIDGKSKDHEKGTQTTT
QGDSEESKNEMQADTQAKIGESLKHKKVKGEEDNGDEVGKEKGKTIVFRRSKHGKEVQIE
EGKDGSIEEGSKGVKTIENIGGKEDSENDKVIEHNKANEDSIEGGSKDGKTTEINASTKE
SMKKDLEDGKTVEINKGKNDSQGESSEDATTVETSGSKNHTEEGYKLDKTSDINARKEDY
KKDGSKDGKIVEISRGTNSTGEFSKDGKTMENSGGKLDSMEESSKDSNIVETNGGKEGSE
DGKTIETNGGKEVSTEESSKDGKIEEVNEGQENSTKKNYEDGKTNDIHGGKEVTMEEGSK
VDKKIEINGGKEYAVEKNSEDGEITNLNGGTNSTGKDSKDSKSVEINGVKDDSLKEDSKN
GNINEINNGKEDSVKDNVTEIQENGNILTNSTSMEPNGDKLDINEDSMKNKTMEAQGNSN
GDSTNGETEETKESNISMNNQNMQDVGSNANSMNDQTAGDDVISTTKEETRTDIESNTSK
EVTSFISNLEKKSPGTQEFQSFFQKLKDYMKYVCPVSSTFEAKDSRSYMSEMISMATKLS
DAMAVLQAKKSGSGQMKTTLQGYQQEVMKTLTILQSVMGKAVSEQQSKNSGSLTLTLSQQ
QAIKGIVLKWEQVMSQFVKIATESEKQFSLEISTENGYHMKKSSNSSSSSSSSSSSSLDF
KHNSENLKGVDMNG
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtttctttgttattcttttgttgcattgtggcaacaagtttaagtctcaat
gtagttttagcacacgagatggtcgtgaatcctccaaacacgattaaagatatagagcct
tacatctcgaatagagcccttggctttgtgttgaaattggagaacaattgtcctataaga
gaacagctaagatcattctttgataagctaaaggatctcttgaagttggagtcttctgtt
acgccgctgatcgaagacaatgaaccaaagacattcaagtttgatcttaaatcgaaatcc
gaaaatctcttgcaaacgatgtttatgattgggaaaggactgttgagttcaagtgtaaga
aaggagatgttcgaagtgatgaaatcgctcactgagttacatgctgcaatcggtagagtt
attatagagaagcacataaaaggcgatgaatcaatgtcactttcgttggaacaaaagaat
gcggtagaaaactcgatatctgaatgggaacaaacgattacccgaatcgtgaagattgtt
gttgaggttaaatcaaaaagttcaagtgaggcttcttggaaagaaagtagtactactgaa
cacaacaatgtttctatgaacggtaacatggtggcgaccaatggagaaaattccgaatcc
acgcaagaaaaattagatggcgttaaaggaagcaatggaggtgatgtatcaatggagact
caagaaggcaataaggtggatgatcttaaagaaggtaatactgtttttgagaatggcgaa
acaaaagagattaatggtgaaaatgcagaatctaataacgagaaggcagtagagggtcaa
ggagaaagtattggagattcggccatagataagaatttggaatctaaagaagatgttaag
tcggaggtagaggataaaagtgatggaagttccatgacagagaacttggaagaagtccaa
agaaacaatggagtttcaacaaaagatacgaatttggagaacaaaggaagtgaggtggag
tctaaagatgataaaatggtaaatgctacaacaaatgatgaagataacacgaaagaaaat
agggaagggactcaagaaaacaacggagaatcattgaaggatgagaatttggagaacaaa
ggtagtgagggagagtctaaagatgataaaatggtaaatgctacaacaaatgatgcagat
cacacgaaggaaaataaggaagagactcaagaaaacaatggagaatcattgaaggatgag
aatttggagaataacgcaggtaataacgaattaaagggtaatggatcagtagaggccaag
acaaataatgaaatttctatggaagcaaagcgagaagagactcaaagaagtaatgaagtt
tatatgaacaaagaaacaacaaaaggtgaaaatgctgattttaataaagagaaggaatca
aatattcaaggagagagtatcggagactcaacgaaaggtaacattttggaggataaagaa
gatgttaagccagaggtagattctaatgtaagtgatggaagttccacgaaggagaggcat
caagaggctcaaggaaatgataaagtttcaacaaaagataagaatttggataacatagga
gctgatgaagagagaaaatatgacaaatcagtaaaggttatgacaaacgatgaaggccat
acgaaagaaatgagggaagaaactcaaggaaacaatggagaatcagtgaagaatgagaac
ttagagaataaagaaaataagaaagaattgaaggatgatggatctgtagatgaaaaaaca
aataatgaaagttccttagaagaaaagggggaacaaactcaaagaggtcacgataattct
gtgaatagcaagttagtggagaacaaaggtggaaatgcatattctaacaaggagaagaaa
gtacatgttggagactcaactaatgataataatattgagagtaaagctaaatcagaggca
gaagtcaagaaaaatgatggaagttccatgaaggagaagggagacgaggtacaagggaac
aacatagaatcaatggaagataagaacttggagaacaaagaaagtcatactgatttaaag
gatgagaagtccattgcggataagcaaaatgtgagaactaccatgaaagacaagcaagaa
gaatctcaaataaacgtgggagagtctaaagatgataagtcggtagaagctaagggaaat
acgaaagagtctaaagatgataagtcggtagaagctaagggaaatacgaaagagtctaaa
gaaagtaagtggacaaagactaatgaaaataaggtaaggaataaagaagagaatgttcat
caaggaaacaaaaacgaatcgaaaaaggtagaaaaaggagagaacaaagagtctaaagac
gcaaaattagtggaagctaaggaaactaagaaactttctaggaaagaaaaccgagaagag
gataatggaggtagtggtgaaaatatcaaagaagacaagaaannnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnngatagtaaaggttaaaggccgatagatcagttgaggtt
aaaagcaaccaaggaaaaaatccatgaagaaaaagcgtgaagaagtttcaaagaaacaac
agaggttcaacaaagataaagactaaaaagactacaaaagaagatagagattctgctaat
aacatggatatagatgttcaaaagggaagtggagagtcagtgaaatacaagaaagacgga
aagaaagaaggaaataaagaagagaagaaagatacaatcaacactaattcaaagaaaaaa
gaaaaggataaaaagaagaagaaagggtctcaaaataacagtaaattgaagaaaaaagaa
gaagatagaaaagagaaggaagagtacgtaaacaatgaattgaagaaaaaagaagataat
aaaaaaaagatgaaagagtccgaaagtagtaacctgaaagaaaaaaacaaagataataaa
gagaagaaagactctggagatagtaaatcaaagaacagaaaggagaaaaaatatgaggac
aacaaatcaaagagaaaagaagaagacaaaaacgagaagaacaaatctgaagataaaaaa
agagaggagaaagactctgaagaccgtaaatctaagaaggcaaaggaaaaaaaacaagag
aaagaagaatctaaagaccttaaaggtaagaaaaaagaaaacgaaaaaatggagaagaaa
gaattagaaaaccataaatcgaagaaaaaagagaaaaatgtagaaaataaaaaagagcat
gaagacaataaatcgatgaagaaggaagaagataaaaaaagaaagaaagaacatgaagac
aataaatcaaggacaaaagaagaggataagaaagacataggaaaattggaagatcataaa
tcgaacgaaaacaaagaagagcacgaagacaaaatatccaaaaaaaatatagaagaaaag
aaaaagaagaaaaagttccaacatggtaaatcgatgaagaaggaaagtgataagaaaaag
aagaaagaaaaagaagagaaaaatgaaacaaaagagattgaaaacagtaaatcacagaat
aatgaagtagataaaaaagggaagaaaagttccaaagaccaacagaagaaaaaagaaaaa
gagacaaaagaatccgaagaaaaatacccgaagaaaaatgaagaagacagaaaaaagcaa
acaagtgttgaagaacataaatcaaaaacaacaggagaaaataagaaacaaaaagaaaca
gaggaagcaaagaacaagtctaaagaagataagaaaaacactaaaacacagagtggaggc
acaaatcaagtaggaaatcaatcagaaacagaaaattctatgaaaagaaaagaagacaag
aaagaatctaaggattccgactcaaaagaagcaaacaatcaacaaaaaagccatgggcaa
gaaaagaaagtaggggttcaagttaattctgaaaaggatacgaagaagactaaagaagat
gtcaatgtgtccatagatggtaaatcaaaagatcatgaaaaaggaacccaaacaacaact
caaggagatagtgaagaatctaagaatgaaatgcaagcagatactcaagcaaagattgga
gaatctttaaaacataagaaagtaaagggcgaagaagataatggagatgaagttggtaaa
gagaaaggtaaaactatagtgtttaggaggtctaaacatggtaaggaagttcaaatcgag
gaaggtaaagacggttctatagaagaaggttccaaaggtgttaagactattgaaaacatt
ggaggtaaagaagattccgaaaatgacaaggtaattgaacataacaaagctaatgaagat
tccatagaagggggttctaaagatggtaagacaactgaaatcaatgcaagtacaaaagaa
tccatgaaaaaagatttggaagatggcaagacggttgaaatcaataaaggtaaaaatgat
tcccaaggggaaagttcagaagatgctacgacagttgaaacaagtggaagtaaaaatcac
acagaagaaggttataaacttgataagacatcagacatcaatgcaaggaaagaagattat
aagaaagacggttccaaagatggtaagatagttgaaataagtagaggtacaaactcaaca
ggagaattttccaaagatggtaagacaatggaaaacagtggaggcaaattagattccatg
gaagaaagttccaaagatagtaacatagttgaaacaaatggaggtaaagaagggtctgaa
gatggtaagacaattgaaactaatggaggtaaggaggtttccactgaagaaagttccaaa
gatggtaagatagaagaagtgaacgaaggtcaagaaaactctacaaagaaaaattatgaa
gatggtaagacaaatgatattcatggaggcaaagaagtaaccatggaagaaggctctaaa
gttgataaaaaaatagaaataaatggaggtaaggagtatgcagtggagaaaaactctgaa
gatggtgagataacaaatttaaatggaggtacaaattccacaggaaaagattccaaagat
agtaagtcagttgaaatcaacggagtgaaagatgattctttgaaagaagattccaaaaat
ggtaacataaacgaaataaataatggtaaggaagattctgtgaaggataatgtgacggag
attcaagaaaatggtaatattttgacaaacagtacatcaatggagcccaatggagataaa
ctagatatcaatgaagattctatgaaaaataagacaatggaagctcaaggaaatagtaat
ggggattcaacgaatggcgaaacagaggagactaaagagagcaatatttctatgaacaat
caaaatatgcaggatgtaggaagcaatgcaaattctatgaatgatcaaacagcaggagat
gacgtaatttccacaacaaaagaggaaacaagaacagatatcgagagcaatacttctaaa
gaagttacaagtttcatatcaaaccttgagaagaaatctccaggcacacaggagttccaa
agtttttttcagaaacttaaagattacatgaaatacgtgtgtccagtctcttcaacattt
gaggcaaaagattcaaggtcttacatgtctgagatgataagtatggccacaaaactgtct
gatgctatggctgtcttgcaagccaagaaaagtgggtcaggacagatgaaaacaacacta
caaggatatcaacaagaagtgatgaagactctaactatcttacaatcggttatgggaaaa
gccgtatctgaacaacaaagcaagaatagtggttcattgacgcttacgttatcacaacaa
caagcaatcaagggaatagtgttgaaatgggaacaagtgatgtctcaatttgtgaagatc
gctacagagagtgagaaacaattttcactcgagatttcaactgaaaacggctaccacatg
aagaaaagttctaactctagctcgagttcgagttcgagttcaagttcaagtttggatttc
aaacataacagtgaaaatttgaagggggtggatatgaatgggtag
DBGET
integrated database retrieval system
