Arabidopsis lyrata (lyrate rockcress): 9302855
Help
Entry
9302855 CDS
T01578
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9302855
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
9302855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
TRAPPC10
BatD
Motif
Other DBs
NCBI-GeneID:
9302855
NCBI-ProteinID:
XP_020871571
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MEEYPEELRTPPVSLVALFGYSELHASITKYLHSQQPPINALAFPDFSHISLLLAHDDQI
SRTSSFRDPLSVADSPSPNPSRCGGILKRDWLLKHRTKVPALVAAFFPSHHIFGDPTQWL
QVCSDLDSLKSVIRPKNIKLVVVVVQSSPHEEISEDRLVALRKRAELDSKYVLFFNSSID
SELTHSLSRLASAFAELALAYYREEGRRIKSRVEKKSSNSLDLNVRYCFKVAVYAEFRRD
WGEALKFYEDAYHSLHEMIGTSTRLPAIQRLVEIKIIAEQLHFKISTLLLHGGKLIEAVT
WFHQHKASYEKVVGSTDFIFLHWDWMSRQFLVFAELLETSSATGQNFSSSNQGTAEISLT
EFEFYPAYYYQLAAHYLKDKKSALQLLLSMSEIAQEIDTSSASITPSVYVGQFAQLLEKG
ETLTLHSITDEEYTRYTISEAKRFQDSLEIIAWLKRSYESFTNLKARRMAALCAFELARE
YFDSADPSNAKFFFDISANLYRQEGWVTLLWEVLGYLRECSRNLGALKDFVEFSLEMVAL
PVTSYDNSGNLRNKNYGPGGPATISGRESIHREVFTLVCREAEPLSSTEGSGFKLATDSP
LHLDIDLVSPLRPVLLASVAFHEQMIKPRTLCSFTLSLLSHLPLPVEIDHLEVQFNQSTC
NFVIRNSQRPLWASASNTVKSGSQVENEPSLVLVPNNWLRLTYAINSEQSGKLECLSVLA
KLGPVFRSCSRAESPAAMEDLPVWKHENSVESLPTKDPILAVFGQKATQIDEPEPQVDVS
LGASGPALVGEDFTMPIVVTSKGHAVYSGELKINLVDVGGGGLFSPREAEPFSLESHHVE
ICGIDGAEGNDESESETGSIKKIQQSFGLVSVPDLKEGESWSCKLEIKWHRPKPVMLFVS
LGYLPHGSEANTQKLHIHKSLQIEGKMPLLISNRFMLPYRRDHLLLNRIKPAPDSEDMSS
LPLNEKSVLVVSAKNCSEIALELVSMSIELDYELGETSCLIQQGSGCGGSPSSANLAAGE
EFKKVFTVIPTTRTPKLGLGSVHLKWRRQGGNITEAYVSTKHKLPEVNVEASPLVMSLNS
PPYAILGEPFTYAVRICNQTQLLQEAKFALADAQSFVLSGSHSNTVSVLPKSEHVLSYKL
VPLTCGEQQLPKITVTSTRYSAEFQPSAVASSVFVFPSAPQAENANSTTK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacccggaagagctcaggacgccgccggtaagtctggtggctctcttcgga
tactcggagctacacgcgtccatcactaagtatctccactcccagcagcctcccatcaac
gctctggcctttcccgacttctctcatatctctctcctccttgctcacgatgatcagatc
agccgaacctcctccttcagagatcctctcagcgtcgccgattctccctctcccaatcct
tccagatgcggcggcatcttgaaacgggactggttgcttaagcatcgcaccaaggtccct
gcacttgtcgcggccttcttcccctcacatcacatcttcggcgatccaactcaatggcta
caggtctgctccgatctcgacagcctcaaatccgtaatccgtcccaaaaacatcaaactg
gtggttgtcgtggtccagtcctctccccatgaggaaattagcgaagatcgtctggtggca
ttgcgaaagcgggcagagttagattctaagtacgtgctcttcttcaattccagcatagac
tctgaactcacacactctctctccagactcgcttctgcatttgcagagttggcccttgct
tattacagagaagaaggacggagaatcaaaagccgagttgagaaaaagagttccaattct
cttgatttgaatgttcgctactgttttaaagtcgctgtatatgcagagtttcgtagagat
tggggtgaagcactcaagttttatgaagacgcatatcattccttgcacgagatgatcggg
acatcgactaggttgcctgcaatacaacgcttggtcgagatcaagatcatagctgagcaa
ttgcatttcaagatatcgacgcttttgttgcatggtggaaaactcatagaagcagtgaca
tggtttcatcaacataaagcatcatatgaaaaggttgttggatccacagactttattttt
ctccattgggactggatgagtaggcagtttcttgtctttgctgagttgctggagacaagc
tcagcaactggtcagaacttttcatcctcgaaccaaggaactgcagaaatatctttgact
gagtttgagttttatcctgcctattattatcagttggctgctcattacttgaaggataag
aaatctgccctgcaactgttgttgtcaatgtctgaaatagctcaagagattgataccagc
tcggcatccattactccttcagtctatgtgggtcagttcgctcagttacttgagaaggga
gaaactcttactcttcactctataacggatgaagaatacacacggtatacaatttcagaa
gcaaagagatttcaggattcccttgaaattattgcttggctgaagagatcttatgaatca
tttacgaaccttaaagcccggaggatggctgccctttgtgcctttgaactagcccgggag
tactttgattcggctgatcccagcaacgcaaaattctttttcgatatttctgctaacttg
tacagacaagaaggttgggtaactttgctctgggaagtgttgggttacctgcgagagtgt
tcgagaaatcttggtgctttgaaagattttgtagagttttcacttgaaatggtggcactg
cctgtaacatcttatgacaattctgggaacttgagaaataaaaattatggtcctggaggt
cctgcaaccatttccggaagagaaagtatacatcgagaagtttttactcttgtctgtcgt
gaagccgagccgttatcctctaccgaaggaagtgggttcaaattagccaccgatagccct
cttcatcttgatattgatcttgtcagtcctctgagacccgttctcctagcttcagttgct
tttcacgagcaaatgatcaagcctcgcactttgtgctcttttacattgtcactactttct
catctacctcttccagttgaaatagatcatctagaagttcagttcaaccaatctacgtgc
aactttgtcatcagaaattcccagaggcctctgtgggcttctgcgtctaacactgtgaaa
agtggtagccaagtagagaatgagccatcgctggtgcttgtgccgaataattggttaagg
ttgacatatgcaatcaattctgagcaaagcggcaagcttgagtgtctttcagttcttgca
aaattggggcctgttttcagaagctgttcaagagccgagagtcctgctgcaatggaggat
ttgcctgtctggaagcatgagaatagcgtggaatctctgccaacaaaggaccctattctt
gcagtatttggccagaaagctactcaaattgatgaacctgaaccacaggtggacgtcagt
ctaggtgcttctggccctgccctagttggagaagattttacgatgcctattgtggtaact
tcaaagggtcatgccgtatacagtggtgaattgaagattaatctagttgatgtgggtggt
ggtggtttgtttagccctagagaagcagaaccgttttctctagaaagccatcatgttgaa
atctgtggtattgatggggcagagggaaacgatgaatccgagtctgaaacagggagcata
aagaaaattcagcaatcttttgggctggtttctgttccagacctgaaggaaggagaatca
tggtcgtgcaaactagaaataaagtggcatagacccaagcctgtcatgctctttgtgtca
ttgggttacttgccacatggcagtgaagccaatacccaaaaacttcacatacacaagagc
ttgcagatcgaagggaagatgcctcttttaataagcaatcggtttatgttgccatataga
agggatcacctattgctcaataggatcaagccagcccctgattctgaagacatgtcttct
ctgcctctgaacgaaaaaagtgtgttagttgtcagtgccaaaaattgctcagaaatagca
ctggaactggtgtccatgtccattgaattagattatgaactaggggaaacttcatgtttg
attcagcagggtagtgggtgtggaggttccccaagctctgctaatcttgcggcaggggaa
gagttcaaaaaggttttcacagtcataccaacgacgagaactccaaagcttggtttggga
tcagtacatttaaaatggaggagacagggaggtaacataacagaggcatatgtttcgaca
aagcacaaacttcctgaagtaaatgtggaggcatcaccactggtaatgagtttgaactct
cctccatatgccattcttggagaacccttcacttacgccgttagaatctgcaaccagaca
cagttgctgcaagaagcaaaatttgctctggctgatgcacagagttttgtcctgtctggg
tctcacagcaatacggtttcagtccttcccaagtcagaacatgtcttaagttataagcta
gtgcctctgacttgcggtgaacagcaactcccaaagataactgtgacatcaacgcgatat
tctgctgagtttcagccatctgcggttgcttcaagtgtctttgtgtttccctcagcccca
caagccgagaacgctaactctaccacaaagtag
DBGET
integrated database retrieval system
