Arabidopsis lyrata (lyrate rockcress): 9308103
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Entry
9308103 CDS
T01578
Name
(RefSeq) G patch domain-containing protein TGH
KO
K13123
G patch domain-containing protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9308103
Spliceosome [BR:
aly03041
]
Complex C
Other components
Complex C specific factors
9308103
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1604
Surp
G-patch
Motif
Other DBs
NCBI-GeneID:
9308103
NCBI-ProteinID:
XP_002874111
UniProt:
D7M1M6
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MGSDEEDFVFHGTPIEREEEIGSRKKKAVAGASGNLRTLPAWKQEVTDEEGRRRFHGAFT
GGYSAGYYNTVGSKEGWAPQSFTSSRKNRAGARKQSISDFLDEDEKADMEGKSLSASSQF
DTFGFTAAEHSRKQAEKEQHERPSAIPGPVPDELVAPVSESIGVKLLLKMGWRRGHSIKD
VRASSDARREARKAFLAFSTDENTKETPDSLVSETEVETSLGPQFSEDIKLSESTPVYVL
NPKQDLHGLGYDPFKHAPEFREKKRSRLSANKEVGFRKPLSMKESLFGPKSGKIAPGFGI
GALEELDVEDEDVYAGYDFDQTYVIEDEQPARPSNDNRLRLTSKEHDVLPGFGAAKNSDY
SMERFNPPNIPKDFVARHKFSGPLEAETKPTVSAPPDVPPPADNNLKLLIEGFATFVSRC
GKLYEDLSREKNQSNQLFDFLRGGNGHDYYRRRLWEEQQKRSDQSKLTLDVKQSPTVPKM
TAETRGSLLGEKPLQRSLKETDTSASSGGSFQFPTNLSDTFTKSASSQEAADAVKPFKDD
PAKQERFEQFFKEKYKGGLRTTDSNRVNSMSESARAQERLDFEAAAEAIEKGKAYKEVRR
ATEQPIDFLAGGLQFTSGGTEQIKDTGVVDMKSSKTYPKREEFQWRPSPLLCKRFDLPDP
FMGKLPPAPRARNKMDSLIFLPDTVKAACTRQVSESQEPKTETSIEEPEVEVEVENVERP
VDLYKAIFSDDSEDDEDQPINGKIQEGQEKKNEAAATTLNRLIAGDFLESLGKELGFEVP
SDVPYQEGIKPMEEESKSRSKPEDSSDKRRDRSGLKEKVEEKRSSLILGSEEEKSRKKRE
KSPRKGSGGNNLSSGEFSGDERRRKRSNKKDRPIDSESDSSSDYHSRDKQGSRSRRKRRE
SSREKRSSHKKHSKHHRTKKSSSSRYSSDEEQKESRREKKRRRD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagacgaggaagatttcgtgtttcatgggacaccaatagagcgcgaagaagaa
atcgggagtcggaagaagaaagcagtcgctggggcttcaggcaatctaagaactctccct
gcttggaagcaagaggtgactgatgaagaaggccggagaaggttccatggagcatttact
ggtggatattctgctgggtattacaatacagtgggatcaaaagagggctgggctccacag
tcatttacatcttcaaggaagaacagagctggagcgagaaagcaaagtatctcagacttt
ctagatgaagatgaaaaggctgatatggagggcaagtcactgtctgcgagctcacaattt
gacacatttgggtttacggcagctgaacattcccgaaagcaagctgagaaagaacagcat
gagaggccatcagccattcctggcccagttcctgacgaacttgttgctccagtttcagag
tcaattggggtcaaacttttgctaaagatgggatggcggcgtggtcattcaataaaggat
gtgcgtgccagttcagatgctcgtagagaagctagaaaagcattcttagccttctctact
gatgagaatacaaaggaaactcccgactcactggtttcggagactgaagtggaaacttct
ctgggtccacagtttagtgaagatattaaactttctgaaagcactcctgtatatgttctc
aatccaaagcaagatctgcatggattaggatatgatccttttaagcatgctcctgaattt
agagaaaagaaaagatctcgcttgtctgccaataaggaggttggcttcagaaaaccttta
tcaatgaaggaaagtctttttggacccaaatcaggaaagattgctccgggatttggcatt
ggagcacttgaggaacttgatgttgaggatgaagatgtctatgctggttacgattttgat
cagacttatgtcatagaagatgaacagccagctagaccgagcaatgacaatagactgagg
ttaacctcaaaagagcatgacgttctgccaggttttggagctgctaagaattctgactac
agtatggagagatttaatcctccgaatatccccaaggattttgtggcgcggcataaattt
tctggtcctcttgaggctgaaactaagccaactgtttctgctcctccagatgttccgccc
cctgcagataataatctgaaacttttgatcgaagggtttgcaacttttgtttcccgttgc
gggaaactatatgaggatctttctagagagaagaaccaatcaaatcagctgtttgatttt
cttcggggaggtaacggtcatgactactacagaagaaggctgtgggaggagcagcaaaag
cgcagtgatcaaagtaagctgacattagatgttaagcagtctccaaccgtaccgaaaatg
actgcagaaacacgtggcagcttattaggggaaaagccacttcagagaagtttgaaagaa
accgatacttctgcttcttctggaggctccttccagttcccgaccaatctctctgacaca
ttcaccaaatcagcttcatctcaagaggcagcagatgctgtgaagcccttcaaagatgat
ccggctaaacaagaaagatttgagcagtttttcaaggagaaatacaaaggagggttacgt
acaacagactccaacagagttaacagcatgtcggaatcagctcgtgctcaagagaggctg
gactttgaggctgcagctgaggcaattgagaaagggaaagcttacaaggaggttagacgg
gctactgaacagcctatcgacttccttgcaggagggctgcagtttacttctggtggaaca
gagcaaattaaagacactggcgtggtagacatgaaatcgagtaagacgtatcctaaaagg
gaagagttccaatggcgtccttcacctcttttgtgcaagcgttttgatcttcctgatccg
ttcatgggaaagctgccacctgctccgcgagcgagaaacaagatggattctctcatattc
ttgccagatacagtgaaagctgcatgtacacgtcaagtatctgagtcgcaagaacctaag
acagagacatcaatagaagagcctgaagttgaggtagaagtggagaatgtggagaggcct
gttgatctttacaaggccatcttctctgatgattctgaagatgatgaagatcaaccaata
aatggaaagatacaagagggtcaagaaaagaagaatgaagcggctgcaaccacattaaac
cgtctaatagctggtgactttcttgaatctctagggaaagaactagggttcgaagtacct
tctgatgtcccataccaggaaggaatcaagccaatggaagaagagagcaagtccagaagc
aaaccggaagactcttcggataaaagacgtgatcgatcgggactgaaagagaaagtggag
gagaagagaagcagcctcatacttgggtctgaagaagaaaagagtagaaaaaaaagagag
aaatcgccaagaaaaggaagtggtggcaacaatctatcatcgggtgaattctcaggagat
gaacggaggagaaaacgatctaataagaaggatagacccattgattcagagagcgattca
tccagcgactaccacagcagggataagcaaggatcaagatcaagaagaaagcgaagagaa
tcttctagagagaagagaagtagccacaagaaacactcaaagcatcacaggaccaagaag
tcatcttcttctcggtatagctcagacgaagaacaaaaagagtcaaggcgggagaagaag
aggcgacgagactga
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