Arabidopsis lyrata (lyrate rockcress): 9309496 Help Entry 9309496           CDS       T01578                                  Name (RefSeq) THO complex subunit 1 isoform X1   KO K12878   THO complex subunit 1 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03013   Nucleocytoplasmic transport aly03040   Spliceosome Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     9309496   09122 Translation    03013 Nucleocytoplasmic transport     9309496  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     9309496    03041 Spliceosome [BR:aly03041]     9309496 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      9309496 Spliceosome [BR:aly03041]  Complex C   Other components    EJC/TREX     9309496  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     9309496 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  efThoc1 CarD_C CENP-X Motif Other DBs NCBI-GeneID:  9309496 NCBI-ProteinID:  XP_002871388 UniProt:  D7M281 LinkDB All DBs Position Unknown AA seq 597 aa AA seqDB search MDAFRDAILQRAPIETFALKTVQEFIQPQKQTKLAQDENQMLENMLRTLLQELVAAAAQS GEQIMQYGQLIDDDDDNIHGQIPHLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCK DVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLS ERSAVNIKGVFNTSNETKYEKDPPKGISVDFNFYKTFWSLQEYFCNPASLISASTKWQKF SSSLAVVLNTFDAQPLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILLQ CLIMFDYLRAPGKNDKDLPSETMKEELKSCEDRVKKLLEITPPKGKEFLRAVEHILEREK NWVWWKRDGCPPFEKQPIDKKSPNAGQKKRRQRWRLGNKELSQLWRWADQNPNALTDSQR VRTPDIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFTARQDLEGFSRFTEMGIE GVVPVELLPPEVRSKYQAKPNEKAKRAKKEEAKGGSQETEGNQIGVSNSEAEAEGGRGDA ETMESDAIADTPTPEEQQRLGGSDTENGQEAGQIEDAETEEAGLMDTDLDHPPTPVS NT seq 1794 nt NT seq  +upstreamnt  +downstreamnt atggatgcatttagagatgctatattgcaacgagctcctattgaaacctttgcactcaag actgttcaagagtttatacaacctcagaaacaaacaaagttggctcaagatgaaaaccaa atgcttgaaaacatgctccggacattgctgcaggagctagtggctgctgctgcgcaatca ggagagcaaattatgcagtatggtcagttgattgatgatgatgatgataatatacatggc cagattcctcatcttctagatgttgtgctttatctttgtgagaaagagcatgtagaaggt ggcatgatattccagctgctggaggatttgacggaaatgtctactatgaaaaactgtaaa gatgtttttggttatattgaaagcaaacaagatatattgggcaagcaagagctttttgca cgtggaaaacttgtaatgttgaggacttgcaaccaacttctccggagactctcaaaggcc aatgatgttgtattctgtggaaggattctcatgtttttggctcacttttttccgttatct gagcgctcagccgtgaatataaaaggcgtttttaatacatctaatgaaaccaaatatgaa aaagatcctccaaaaggcatttctgtagatttcaacttctataagacattttggagttta caggagtatttctgtaatcccgcttctcttatttccgcatctaccaagtggcagaaattt tcatccagtttggcggttgttttaaacacctttgatgctcaaccactaagcgaagaagag ggagaggctaatagtttggaggaagaggcagcaacttttaatataaagtacctaacaagt agtaaattgatgggtttagagttaaaggattcgagtttccgacgacatattcttctccag tgcctcattatgtttgattatctaagggcaccagggaagaacgacaaagatctgccatct gaaaccatgaaggaagaacttaagtcatgtgaggatcgtgtaaagaaattgcttgagatc actccgcctaaagggaaagaattcctccgtgcagttgagcatatactggagcgcgaaaag aattgggtctggtggaaacgtgatggatgcccaccatttgaaaagcaaccgatagataag aaatcacctaatgcagggcaaaagaaacggagacaaagatggagattgggcaataaagaa ctctcccaactttggagatgggctgatcaaaatccgaatgctttgactgattctcaacgt gtccgaacccctgacattgcagactactggaaaccattagcagaagatatggatccatca gctggcatagaagatgagtatcatcataaaaacaacagagtttactgctggaaaggtctt cggtttacagctcggcaagaccttgaaggattttctaggtttaccgaaatgggaatcgaa ggagttgtcccagttgaactattgccgcctgaggtccggtctaaataccaagctaaaccg aacgaaaaagccaaacgagctaagaaagaagaagccaaaggtggatctcaggaaacagag ggaaaccagattggtgtttctaatagtgaagctgaggctgaaggaggaaggggtgatgca gagacgatggagagtgatgctattgcagacactcctacgcctgaggaacaacaaagactc ggtggttctgacacagaaaacggtcaagaggccggtcaaatcgaagacgcagagacagaa gaagctggtttgatggacactgatcttgatcacccccctacgcctgtctcatga

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