Arabidopsis lyrata (lyrate rockcress): 9311023
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Entry
9311023 CDS
T01578
Name
(RefSeq) ABC transporter B family member 5 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9311023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9311023
04147 Exosome [BR:
aly04147
]
9311023
04090 CD molecules [BR:
aly04090
]
9311023
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9311023
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9311023
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9311023
CD molecules [BR:
aly04090
]
Proteins
9311023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_5
AAA_15
DUF87
SbcC_Walker_B
nSTAND1
AAA_7
AAA_25
AAA_30
DUF815
ATP-synt_ab
SapB_1
Motif
Other DBs
NCBI-GeneID:
9311023
NCBI-ProteinID:
XP_002872874
UniProt:
D7M485
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MKMGILEENTKTVPFYKLFSFSDSTDVLLMIVGSIGAIVNGVCSPLMTLLFGDLIDALGQ
NQNNEEIVEIVSKVCLKFVYLGLVALGAAFLQVACWMITGERQAARIRSLYLKTILRQDI
GFFDVETSTGEVVGRMSGDTVLILDAMGEKVGKFIQLIATFFGGFAIAFVKGWLLTLVML
TSIPLLAMSGATMAIIVSKASSREQAAYAKASTVVEQTLGSIRTVASFTGEKQAMSSYRE
LINLAYKSNVKQGFVTGLGLGVLFLVFFCTYALGIWFGGEMILRKGYTGGAVINVMVTVV
TSSMSLGQATPCLTAFAAGKAAAYKMFETIERKPSIDTFDLNGKVLEDIRGVIELRDVCF
SYPARPKEEIFGGFSLLIPSGATVALVGESGSGKSTVISLIERFYDPNSGQVLIDGINLK
EFQLKWIRGKIGLVSQEPVLFSSSIMENIRYGKESATVEEIQTAAKLANAAKFINKLPRG
LETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMVN
RTTVIVAHRLSTVRNADTIAVIHRGKIVEEGSHSELLKNHEGAYSQLIQLQEINKESKRL
EISDGSISSGSSRGNNSRRQDDDSVSVLGLLAGQENTKRPQELSQNVSITRIAALNKPEI
PILILGTLVGAVNGTIFPIFGILFAKVIGAFFKAPQELKRDSRFWSMIFLLLGVASLIVY
PTNNYLFAIAGGRLIRRIRSVCFEKVIHMEVGWFDKPENSRGAMGARLSADAALIRTLVG
DSLCLSVKNVASLVSGLIIAFTASWELAVIVVVIIPLIGINGYVQIKFMKGFSADAKRKY
EEASQVANDAVGSIRTVASFCAEEKVMEIYNKRCEDTFKSGIKQGLISGLGFGLSFFILY
SVYATCFYVGARLVKAGKTNFNNVFEVFLALALTAIGISQASSFAPDSSKAKGAAVSIFR
IIDGKSKIDSRDESGMVLENVKGDIELCHISFTYQTRPDVQVFRDLCLTIRAGQTVALVG
ESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTVRAN
IAYGKGGQETTETEIVAASELANAHTFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAI
VKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGV
IVEKGTHETLINIEGGVYSSLVQLHISASN
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggggatattggaagagaacacaaagactgtaccgttctacaaattgttttcc
ttctcagattctaccgatgtgttgttgatgattgttggttcgatcggagctatcgtaaac
ggtgtttgttctccgttaatgacattattgtttggtgatctcattgatgcattgggtcaa
aatcagaacaacgaagagattgttgagatagtttccaaggtttgtttgaaatttgtctac
cttggacttgtagcacttggagcagcctttcttcaggtggcttgttggatgataactggg
gaaagacaagctgcaagaataaggagtttgtatctgaaaacgattctaagacaagacatt
ggattcttcgatgtcgaaacgagcaccggagaagttgttggtcgaatgtctggtgatact
gttcttatacttgatgctatgggtgagaaggttgggaagtttatacagttgattgcaaca
ttctttggtggatttgctatagcgtttgtgaaaggatggttacttacacttgttatgttg
acctcaattcctcttctagctatgtctggtgcaactatggcgattatagtttctaaagct
tcgtctcgagaacaagctgcttatgcgaaagcatcaactgttgttgaacaaactttgggg
tctattcgaaccgttgcttctttcacgggagagaagcaagcgatgagtagctacagagaa
ttgataaatttggcctataaatcgaatgttaagcaaggttttgttacgggtttaggtctt
ggagtactgttcttggtgttcttttgtacttatgctttgggtatatggtttggtggtgaa
atgatactcagaaaagggtatacaggtggtgcagtgatcaatgtaatggtcactgtagtc
acgagttcgatgtctttagggcaagcaacgccttgtcttactgcatttgcggctggtaaa
gctgcagcttataagatgtttgaaacaatcgaaagaaagccttcgattgatacttttgac
ctaaatgggaaggttttagaagatattcgaggcgtaattgaactgagagatgtgtgtttt
agttaccctgccaggcctaaagaagagatttttggcggattctctctgctgattccgagt
ggtgcaaccgttgctttggtaggagaaagcgggagtgggaaatctactgtgatcagtttg
attgaaaggttttatgatccgaattccggccaagtgcttattgatggtattaacttaaag
gagtttcagttgaaatggattaggggaaagattggattggttagtcaagaacctgttctg
ttttcttctagtataatggagaatatcaggtacgggaaagagagtgcaacggttgaagag
attcaaacagcagcaaagctagcaaacgcggctaagttcatcaataagttgcctcgaggt
ttagagactttggtaggggaacatggaactcaactctcaggaggacaaaaacagaggatt
gctatcgcgagagcgatacttaaagatccgcggatcttgctgttagatgaagctactagc
gctcttgatgcggaatccgaaagagtggttcaagaggctttagatagggtaatggtgaac
cggactactgtgattgtcgcgcatcggttaagcacagtgagaaatgctgatacgattgct
gtgattcaccgtggaaagatagtggaagaaggttcacattcagagttacttaagaatcac
gaaggggcttattcacagcttatacagttacaagagataaacaaagaatcaaagcgattg
gagatttctgatggatcaatcagcagtggatcatcaagaggaaacaacagcagaaggcaa
gatgatgactctgtttcggttcttggtttacttgcaggccaagagaatactaaaaggcct
caagaactgtcacagaatgtgtcgattactcgaatcgctgctctaaacaaacctgagatt
ccaattcttatacttggaaccttagtgggtgcagtgaacggcactatattccccattttc
ggtatcctctttgctaaagtaatcggagctttcttcaaagcgcctcaagagctgaagaga
gattcgagattctggtcgatgatattcctacttcttggtgtagcctctttgatagtgtat
ccaacgaataactacttgtttgctatagctggagggagactgattcggaggataagatca
gtgtgttttgagaaagttattcatatggaggttgggtggttcgataaacctgagaactcg
agaggtgcaatgggagcgaggctctctgctgatgcagccttgatcaggacacttgtggga
gactcgttgtgtctatcggttaagaacgttgcgtctctggtgtcaggactaatcatagct
ttcacggcgagctgggaattggcggttattgtcgtagtaattattccattaattggaatc
aacggttatgttcaaattaagttcatgaaaggcttcagtgcagacgcaaagagaaagtac
gaggaggcgagtcaggtggcaaacgatgcggtggggagtataagaacggttgcgtctttc
tgtgcggaggagaaagtgatggagatatacaataaaagatgtgaagatacgtttaaatct
gggattaagcaagggttaatcagcggattagggtttggtctctcctttttcattctttac
tctgtctacgctacttgtttctacgtgggtgctagattggttaaagccggaaagacaaac
ttcaacaatgtttttgaggttttcttagccttagcgttgacagcgattgggatatctcag
gcgagctcttttgctcctgattcgagtaaagcaaagggtgctgctgtttctattttcaga
attattgatgggaaatcgaagatagattcgagagatgaatcaggaatggtgttggagaac
gtaaagggagatatcgagctttgtcacataagcttcacttaccaaactagacctgacgtt
caggtctttcgtgacctctgtttgaccattcgtgccggacagactgttgctttggttggc
gaaagtgggtcgggtaaatctacggtgatttcactgttacaaaggttttacgatccggat
tcgggtcatataactctagacggagtggagctcaagaagctgcaactaaaatggctgaga
caacaaatggggcttgtagggcaagagcctgtactgttcaacgacacggtacgagccaac
attgcttacggaaaaggcggccaggaaacaaccgagactgagattgtagctgcctcggag
ctggctaatgcccacacgttcatctctagtatacaacagggttatgatacggtggtaggg
gagagagggatacaattgtcaggaggacagaagcaacgcgtggcaattgcacgcgccatc
gtgaaagaaccgaagattctgttacttgacgaagcgacgagcgctttggacgctgaatcg
gagcgggtggttcaagacgcgcttgaccgggtgatggtgaacaggaccaccgtagtagtg
gctcacaggctttcgacgatcaagaatgctgacgtcatcgccgtcgtcaagaacggtgtg
atcgtagagaaagggacgcacgaaacgttgatcaatatcgaaggtggtgtttattcttcg
cttgttcaacttcacattagtgcttctaattga
DBGET
integrated database retrieval system
