Arabidopsis lyrata (lyrate rockcress): 9313172
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Entry
9313172 CDS
T01578
Name
(RefSeq) ABC transporter B family member 18
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9313172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9313172
04147 Exosome [BR:
aly04147
]
9313172
04090 CD molecules [BR:
aly04090
]
9313172
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9313172
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9313172
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9313172
CD molecules [BR:
aly04090
]
Proteins
9313172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
AAA_16
AAA_15
Zeta_toxin
RsgA_GTPase
AAA
ABC_ATPase
AAA_23
AAA_30
DEAD
ATPase
Motif
Other DBs
NCBI-GeneID:
9313172
NCBI-ProteinID:
XP_002877104
UniProt:
D7LPT4
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MKSWGSIRSIFMHADGVDWILMALGLIGAVCDGFIPPVIFFICSILLNNLDGSSFDDETF
MQTVSKNAVALLYVACVAWVICFIEGYCWTRTGERQAAKMREKYLRAVLRQDVGYFDVHV
TSTSDVITSVSSDSLVIQDFLSEKLPNFLMNTSAFVASYIVGFILLWRLIIVGFPFILLL
LIPGLMYGRALIGISMKIREEYNEAGSIAEQVISSVRTVYAFGSEKKMIEKFSTALQGSV
KLGLRQGLAKGIAIGSNGITYASWAFLTWYGSRMVMNHGSKGGTVSTVIVCVTFGGTSLG
QSLSNIKYFSEAFVVGERINKVINRVPNIDSDNLEGQILETTRGEVEFNHVKFTYPSRPE
TPIFDDLCLRIPSGKTVALVGGSGSGKSTVISLLLRFYDPIAGEILIDGLPINKLQVNWL
RSQMGLVNQEPVLFATSIKENILFGKEDASMDEVVEAAKASNAHNFISQFPNSYQTQVGE
RGVQLSGGQKQRIAIARAIIKSPIILLLDEATSALDSESERVVQEALDNASVGRTTIVIA
HRLSTIRNADVICVVHNGRIIETGSHEELLEKIDGQYTSLVRLQQMENEESDRNINVSVE
EGRVLSLSNDLKYSPKEFIHSTSSRNVREFSDLILKDRKSPVPSFKRLMAMNRPEWKHAL
YGCLGAALFGAVQPIYAYSTGSMISVYFLTNHDQIKEKTRIYVLLFIGLALFTFLSNISQ
HYSFAYMGEYLTKRIREHMLGKILTFEINWFDKDENSSGAICSRLAKDANVVRSLVGDRM
SLLVQSISAVSITCAIGLVISWRFSIVMISVQPVIVVCFYTQRVLLKRMSRNANNAQDES
SKLSAEAISNIRTITAFSSQERIINLLKMVQEGPRKDSARQSWLAGIMLGTSQSLITCVS
ALNFGYGGRLIADGKMKAKAFLEIFLIFASTGRVIAEAGTMTKDLVKGSDAVASVFAVLD
RNTTIEPENPDGYVPKKVKGQIRFLNVDFAYPTRPDVIIFRNFSIEIQDGKSTAIVGPSG
SGKSTIISLIERFYDPLRGIVKIDGRDIRSYHLRSLRQHIALVSQEPTLFAGTIRENIMY
GGASNKIDESEVIEAAKAANAHDFITSLSDGYDTYCGDRGVQLSGGQKQRIAIARAVLKN
PSVLLLDEATSALDSQSERVVQDALERLMVGRTSVVIAHRLSTIQNCDTIAVLDKGEVVE
CGNHSSLLAKGPTGVYFSLVSLQRTLC
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttggggaagcataagatcgatattcatgcatgcggacggtgtagattggata
ttgatggcgttaggcttaatcggagccgtttgtgatggcttcatccctcctgttatattt
ttcatttgtagcatactactgaacaacctcgatggctcctctttcgatgatgaaaccttc
atgcaaaccgtttccaagaatgctgtagctttgctttatgtggcttgtgtagcttgggtg
atatgtttcattgaaggatattgctggacaagaacaggagagagacaagcggcaaaaatg
agagagaagtacttaagagcagtgttaagacaagatgtgggttactttgatgttcatgtc
acaagcacttctgatgttatcaccagtgtctctagtgacagcctagttattcaagacttc
ctcagtgaaaagttaccaaactttttgatgaatacatctgcatttgtcgcaagttacata
gtgggtttcatattgctgtggagactcataatcgtaggcttcccgttcatcctcctcctc
ttgatccctggactaatgtacggacgtgccctcatcggcatctcgatgaagatacgcgag
gagtacaatgaggctggctctatagctgaacaggtcatctcgtcagttcgaaccgtctac
gcatttggtagtgagaaaaagatgatcgagaagttctcaactgcgcttcaagggtcggtg
aagcttgggttgagacaagggctagctaagggaatcgccattgggagcaatggtatcact
tatgctagttgggcgttcctgacttggtatggaagtcggatggttatgaaccatggctcc
aaaggcggtactgtatccactgtcattgtttgcgtcaccttcggcggcacatcacttggt
caaagtttgtcgaatatcaaatatttctcagaggcatttgtagtaggggaacgaattaac
aaagtgataaatagagtccctaatatagactcagacaacttggaaggtcagattctggag
acaactagaggagaagtagaattcaaccacgtgaagttcacctacccgtctagacctgaa
accccaatctttgatgacttatgtctcagaattccatctgggaaaactgtcgctctggta
ggcggaagcggatcaggaaaatcaaccgtcatatcacttttactaaggttctatgacccg
atcgctggagagattctcattgatggtttgcctattaataagttgcaagtgaattggttg
agatcgcaaatgggtctagttaaccaagagccagtgcttttcgccacatcgataaaggag
aacatattatttggtaaagaggacgcatccatggatgaggtagtggaagctgccaaggct
tcaaatgcacataatttcatatctcaattccccaatagttaccaaactcaggttggggaa
agaggagtacaattatcaggaggccaaaagcagaggattgcaattgcacgagcaataatt
aaatcaccaataattctccttttagatgaggcaacaagcgcattggactcagaatccgaa
agggtggtccaagaagccttagacaatgcctctgttggccgtacaactattgtgattgcc
caccgcctctctactattcgtaatgcggatgttatttgtgtagtccataatggtcgcatt
atagaaactggatcacacgaagaactcttggagaagatagatggtcaatacacctctcta
gtccgtttacaacaaatggagaatgaagaatcagatcgtaacatcaatgtaagtgtagaa
gagggccgagtattgagtttaagcaatgatttgaagtatagcccaaaagagtttattcat
agcacgagctcaagaaatgttagagaattttctgatttgattcttaaggataggaagtca
ccggtgccatcttttaaaagattgatggcaatgaatagacccgaatggaaacatgcatta
tatggttgcttaggtgcagctctatttggggccgtacaaccaatttacgcatattctaca
gggtcaatgatatcagtgtatttcctaactaaccatgatcagatcaaagagaaaaccagg
atctatgtgttgttatttatcggtctagctttgttcactttcttgtccaacatcagtcaa
cattatagttttgcgtacatgggcgaatacctaacaaaacgtatccgagaacacatgctt
gggaagatactaacgtttgaaatcaattggttcgacaaagatgagaattcgagtggtgca
atttgctcaagactagcaaaagatgctaatgtggtgagatcgttggttggtgatcggatg
tcattgcttgtacagtctatatcggcagtgagcatcacttgtgcaattggtttggtcatc
tcttggcgattctccatcgtgatgatttcggtgcagccagtgattgtcgtgtgcttctac
actcaacgcgttctgctcaagagaatgtcgagaaatgccaacaacgcccaagatgaaagc
agtaaactatctgcagaagctatctcaaatattcgaaccatcacagctttctcgtcacaa
gaacggatcattaacttacttaaaatggtccaagaaggtccacggaaagatagcgcccgc
caatcgtggttagcaggaattatgttggggacatcacaaagccttataacatgcgtttcg
gctttgaatttcgggtatggtggtagactaattgctgatggaaagatgaaggcaaaagca
ttcttagagatatttttaatttttgctagtacgggtcgggttattgccgaagctgggacc
atgacgaaagatctagtcaagggatcagatgcggttgcgtcagtgtttgcagtattagat
cgcaacacaaccattgagccggagaacccagacggatacgtcccaaaaaaagtaaaggga
caaataagatttctcaatgtggactttgcttacccaacacggcctgatgtgattatattt
cggaacttctccattgaaatccaagatggtaagtcgacagcgatcgtcggtccaagcggg
tcaggtaaatccacaataattagcttgatcgagcggttctacgacccgttaagaggtatt
gttaaaatcgatggtcgtgatataaggtcgtatcatttgaggtcacttcgtcaacacata
gctttggttagccaagagccaacattatttgctgggacaatacgagagaatatcatgtac
ggaggagcatctaacaagatcgatgagtcggaggttatcgaagcagcaaaggcagccaac
gctcatgattttatcacatcactatctgacggctatgacacgtactgcggggacagggga
gtgcaattgtctggtggtcaaaaacagagaatcgcgattgctcgagcggttctaaagaac
ccatcagtgttgctccttgatgaagctacaagcgctttggacagccaatcggaacgcgtg
gtgcaagacgcgcttgagcgtttgatggttgggaggacaagcgttgtgatcgctcatagg
cttagcacgatccagaactgtgacacaatcgctgttttagacaaaggagaagttgtcgaa
tgtggaaaccactcgtctttattggcaaagggtccaacgggagtttatttctcactggtc
agtcttcagagaactctctgttga
DBGET
integrated database retrieval system
