Arabidopsis lyrata (lyrate rockcress): 9314046
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Entry
9314046 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9314046
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00052
Galactose metabolism
aly00511
Other glycan degradation
aly00600
Sphingolipid metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
9314046
09103 Lipid metabolism
00600 Sphingolipid metabolism
9314046
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
9314046
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
9314046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
9314046
NCBI-ProteinID:
XP_002877978
UniProt:
D7LUT9
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MVSLATQMIIPSENGYRVWEDQTLFKWRKRDPHVTLRCHESVQGALRYWYQRNNVDLTVS
RSAVWNDDAVQAALDSAAFWVDGLPFVKSLSGYWKFFLAPKPANVPDKFYDPAFPDSDWN
ALPVPSNWQCHGFDRPIYTNVVYPFPNDPPHVPEDNPTGCYRTYFQIPKEWKDRRILLHF
EAVDSAFFAWINGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLED
QDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVKIDNMQESSKHLVLS
NFIIEAAVFDTKNWYNSEGFNCELSPKVAHLKLNPSPSPTLGFHGYLLEGKLDSPNLWSA
EQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRV
GKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLS
GHLKHPAKEPSWAAAMLDRVVGMVERDKNHTCIISWSLGNEAGYGPNHSAMAGWIREKDP
SRLVHYEGGGSRTSSTDIVCPMYMRVWDIIKIALDQNESRPLILCEYQHAMGNSNGNIDE
YWDAIDNTFGLQGGFIWDWVDQGLLKLGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDR
TPHPALHEVKHCYQPIKVSLTDGLIKVANTYFFHTTEELEFSWKIHGDGLELGSGTLSIP
VIKPQNSFEIEWKSGPWFSFWNDSNAGELFLTINAKLLNPTRSLEAGHLLSSTQIPLPAK
RQIIPQAIKKTDTIITCETVGDFIKISQQDSWELMINVRKGAIEGWKIQGVLLMKEDILP
CFWRAPTDNDKGGGDSSYFLRWKAAQLDNVEFLVESCSVKSITDKAVEIEFIYLGSSASV
SSKTDALFKVNVTYLIYGSGDIITNWSVEPNSDLPPLPRVGIEFHIEKTLDRVEWYGKGP
FECYPDRKAAAHVAIYEHNVGDMHVPYIVPGESGGRTDVRWVTFRNKDGVGIYASTYGNS
SPMQMNASYYTTGELNRATHEEDLIKGQNIEVHLDHKHMGLGGDDSWTPCVHDKYLIPPK
PYSFSLRLCPITASTSVLDIYKDQLPC
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattagcgacccaaatgattattccttctgaaaatgggtatagagtttgggag
gatcagacccttttcaagtggcgcaagagagatcctcatgtcaccttgcgttgccatgaa
tccgtccaaggggctttgaggtactggtatcagcgcaataacgtggatctcaccgtatca
agatctgctgtttggaatgatgatgctgttcaagctgctcttgatagcgctgctttttgg
gttgatggcttgccctttgttaagtctttatctggttactggaagtttttcttggctcct
aaacctgcaaatgttcctgacaaattttatgatcctgcattccctgattcagactggaac
gctttacccgttccttccaattggcagtgtcatggatttgatcggcctatctataccaat
gtggtgtaccctttcccgaatgacccgcctcatgttcctgaggataatcctactggttgc
tacagaacctacttccagattcccaaagagtggaaggacagaagaatacttcttcacttt
gaagctgtagactccgcattctttgcttggataaatggcaaccctgttgggtacagtcaa
gacagcaggttaccggctgaatttgaaatatctgattattgctatccatgggactcgggg
aaacaaaatgttcttgctgttcaagtctttagatggagtgatggttcataccttgaagac
caagatcattggtggttgtctggtattcatcgagatgtgcttttgttagcaaagcccaag
gtattcattgctgactactttttcaagtcaaaattggcagatgacttttcctacgcagac
atccaggttgaagtgaagatagacaatatgcaggagtcctcaaagcatcttgttctttct
aacttcatcatagaggctgccgtatttgatactaaaaattggtacaactctgaaggattt
aattgtgaactttctcccaaggtggctcatttgaagcttaatccttctccaagcccaact
cttggatttcatggttatttgcttgagggaaaactggattcgccaaatctctggtcagct
gaacaaccaaatgtttacatcctcgttttaactctaaaagatacatctgggaaagtcctt
gattctgaatcaagcattgttggcattcggcaagtttcaaaggccttcaaacagcttctt
gttaatgggcacccagtcgtgataaaaggtgtaaacaggcatgagcaccatccacgtgtt
gggaagaccaatatagaggcctgcatggtcaaggatttaatcatgatgaaagaatataat
atcaatgcggtgcgaaacagtcattatcctcaacatccccgctggtatgaattatgtgat
ttgttcggcatgtacatgatcgatgaagccaatatagagacacacggttttgatctctct
gggcatctgaagcaccctgcgaaagagccaagctgggcagccgctatgctggatcgagta
gttgggatggttgaaagagacaaaaaccatacatgcataatttcttggtcactgggaaat
gaggctggctatgggcctaatcattctgctatggcaggttggattagggaaaaggacccc
tcacggttggtgcactatgaaggtggtggttccagaacaagttctactgatatagtctgc
cctatgtacatgcgggtttgggacatcatcaagattgcacttgatcaaaatgaatcacga
ccgttgatattatgcgagtatcaacatgctatgggtaacagcaacgggaatatagatgag
tactgggatgcaattgacaatacctttggcctgcaaggaggtttcatatgggactgggtt
gaccaggggctattgaaactggggtcagatggcattaagcgttgggcatatggaggggac
tttggtgaccagcctaatgatttgaacttctgtctcaatgggcttatatggcctgaccga
actcctcatccagcactccatgaggttaagcattgctatcaaccaatcaaggtttcattg
acggatggcttgataaaggttgcaaacacttactttttccacacaacagaagaattggag
tttagttggaaaattcatggggacggtcttgaacttggatctggaactctctctattcct
gtgataaagccacaaaatagttttgagatagagtggaagtcaggtccatggttttccttc
tggaatgactcaaatgctggagaattgtttctgacaataaatgccaagcttctaaatcct
actcgttcgcttgaagctggtcatcttttgtcttcaacgcagattcctttaccagcaaag
agacaaataataccgcaggcgataaaaaagacagacactattatcacttgtgaaactgtt
ggagatttcattaagatcagccagcaagattcatgggagctaatgataaatgtccgaaaa
ggagctattgaaggttggaagattcaaggagttctccttatgaaggaagatatactgcca
tgcttttggcgagcacctacagacaatgataaaggtggaggtgactctagttattttttg
agatggaaagcagcacagttggataatgtggagttccttgttgaaagctgttcagtgaag
agcatcactgataaagccgtagagatagagttcatataccttggttcttcagcttctgtc
tcttcaaagacagatgccttattcaaagtcaatgttacatatctgatctatggttccgga
gatatcatcaccaattggtctgtagaaccaaactctgatcttccaccgctaccacgtgta
ggtatagaatttcacattgaaaaaacactggaccgtgtagaatggtatggcaaaggtcca
tttgagtgttacccagaccgaaaagcagcagcccatgtggccatatatgaacacaatgtt
ggagacatgcatgtcccttatattgttccaggagaaagtggtggtagaacagatgttagg
tgggtgacattccgaaacaaagatggtgtaggaatatatgcttcaacatatggtaactct
tccccaatgcagatgaatgctagttactatacaacaggtgagcttaatcgtgcaacgcat
gaagaggatcttatcaaaggacaaaacatcgaggtgcatctggaccacaaacacatgggt
cttgggggagatgatagctggactccatgtgttcacgataagtatctgattccacccaaa
ccatattcattctctctaaggttgtgcccaattactgcatccacttcggtcttggacatc
tacaaggaccaacttccctgctag
DBGET
integrated database retrieval system
