Arabidopsis lyrata (lyrate rockcress): 9318945
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Entry
9318945 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9318945
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9318945
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9318945
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9318945
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9318945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
DUF3557
DUF1955
Motif
Other DBs
NCBI-GeneID:
9318945
NCBI-ProteinID:
XP_020886081
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MGFKLQMSWMPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSH
CDSYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEF
LRYVIDACHNTSLRLKKLRIKGNEPFNGNTVVKEIFGGALQSQVKCLSCGAESNKADEIM
DISLEILHSSSVKESMQKFFQSEILDGNNKYKCETCEKLVTARKQMSILQAPNILVIQLK
RFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVK
DSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKTLVTSNGTTSHEVNGCE
TSNPQKFIGPLNGVNMKPQSEQSFQKVKLASSKPHKFIGPKLRAEQALQEDNLLSSKVEK
APLKPHAKVIISVNLGAKRVSPSVNGRLSFHQDENIAPKANKENSVSVLPTRVKSGTERK
FGTENGGNGVKENGSAPGSSNHKVTVHPHERSNGSCNGGDHYKDNLHPCGSNGSQNGTVH
QEIERNGVSTTQSKGLCSSTNEDPCILLRKDESSRNELEAIKESLKKDALSHLRSCGWYD
KVHISMRAKKRLRTEQSGGEDGNDLKRLLIEDVKSSLKSQIPEGLKADLVNRIWEISKKK
YS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggatttaaactgcagatgagctggatgccgagtctactgagtcagaagcgtaggaat
ggtcctcccttagggttacggaatctcggcaacacctgttacctcaatagtgtccttcag
tgtctcactttcactcctcctctcgctaatttctgccttactcacaaacactcctctcac
tgtgactcatatgtggatggggagaggaaacgggattgtccattttgcatagttgagaaa
agaatagcaaggtctcttagtgtggatctaacaaccgatgcgcctaacaagatttcaagc
tgtctcaaaatttttgctgagcattttaagcttgggcgtcaagaggatgctcatgagttc
ttgcggtacgtcattgatgcatgccacaatacgtctctccgcctcaagaagttgaggatc
aagggtaatgagccctttaatggcaatactgtcgtcaaggagatttttggtggtgctttg
cagagccaggtcaagtgtttgtcatgtggtgccgagtctaataaagccgatgagattatg
gatatcagtcttgagattttgcatagtagctctgtcaaggagtctatgcaaaagtttttt
caatcagagattttagatggcaacaataagtataaatgcgagacctgcgaaaaactggtg
acggcgaggaagcagatgtctatactccaagcgcctaatatccttgttatccaattgaaa
aggtttgggggtatttttggtgggaagattgataaagccatttcatttggtgagattctg
gttctctcgaacttcatgagtaaagcaagcaaggaccctcaaccggaatacaagcttttt
gggataattgtgcactcaggattttctcctgaatctgggcactattatgcatacgttaag
gattccttgggtagatggtattgctgcaatgattcgtttgtctcgctctccaccttgcag
gaggttttatcagagaaagcttatatcctgtttttcagccgttcaaaccagaggccagcg
tctgctaaaactctggtaacatccaatgggactacatctcatgaagttaatggctgtgag
acatcaaatccccagaagtttattgggccccttaatggtgtcaacatgaaaccacaatcc
gagcagtccttccagaaggtaaaactggcttcttcaaagccccataaatttattgggccc
aaactacgagccgagcaggccctccaagaggataacctgctttcttccaaagttgaaaag
gcgcctttaaagccacatgcgaaagtcattatatctgtcaaccttggtgccaaaagggtc
tctccttctgtcaatggtagactttctttccaccaagatgagaacatagctccaaaagcg
aacaaagagaatagtgtatcagttttgccgactagagttaagtctggcacggagagaaag
tttggtactgaaaatggtggcaatggagttaaagaaaacggcagtgcaccaggtagtagt
aatcataaagtgacagtgcatccccatgagcgtagtaatggctcctgcaatgggggtgat
cactacaaggataacttacatccatgtggaagtaatggctcacaaaatggaactgttcac
caggaaattgagaggaacggtgttagtaccacccaatccaaaggcttgtgttcttcaaca
aatgaagacccctgcattttgcttagaaaagacgaatcatctcggaatgaacttgaagca
atcaaagagagcctgaagaaagatgcgttgtcacatctacggtcatgcggatggtatgac
aaggtacacatctccatgcgggccaagaagagattgcgtacagagcaatcaggaggagaa
gatggtaacgacttaaagaggttgttgattgaagatgtgaaatcaagtttaaaatcgcag
attccagagggattgaaagcagatctggtaaaccgtatatgggaaattagcaagaagaag
tactcgtga
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integrated database retrieval system
