Arabidopsis lyrata (lyrate rockcress): 9320151
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Entry
9320151 CDS
T01578
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9320151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9320151
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
9320151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
SOP4
Motif
Other DBs
NCBI-GeneID:
9320151
NCBI-ProteinID:
XP_020885852
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MIADGAEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPPKY
YDLYMRAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKE
APSKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVTDAVEFVL
LNFTEMNKLWVRMQHQGPAREKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLP
RVLEQIVNCRDEIAQYYLIDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIMTVLSRLME
RLSNYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHP
DRLDYADQVLGSCVKQLSGKGKIDDTRATKELVSLLSAPLEKYNDVVTALKLTNYPLVVE
YLDTETKRIMATVIIRSIMKNNTLITTAEKVEALFELIKGLINDLDEPQGLEVDEDDFEE
EQNSVARLIHMLYNDDPEEMFKIVSILKKHFLTGGPKRLKFTIPPLVVSTLKLIRRLPVE
GDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFRLYLQCAEAANKCDEEPIAYEFF
TQAYILYEEEISDSKAQVTALQLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWLEDRETIQDGERVLLCLKRALKIANSAQQMANKARGSTGSVTLFIEILN
KYLYFYQKGVPQITVESVESLIKLIKNEESMASDPSAESFFASTLQFMEFEKQKEGAIGE
RYQEIKV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggagcagaagatgaagagaaatggctcgccgccggtgctgctgctttc
aagcaaaacgcattctacatgcaacgcgctattgactcgaataatctgaaagatgctctc
aagtattcggctcagatgcttagcgagttacggacttcgaagctatcacctcccaagtac
tatgatctctatatgcgagcttttgatgaattgaggaaacttgagattttctttatggaa
gaaactcggcgtggctgctcggtcattgaactctatgagctggttcagcatgctggtaac
atattaccacgtttgtatctcctatgtacagcaggatccgtttatatcaaaaccaaggaa
gctccttccaaggaaattcttaaagatcttgttgagatgtgtcgtgggattcagcatcct
ctacgtggtctcttcttgagaagttaccttgcgcagattagtcgagataaattacctgac
attggttctgagtatgaaggagatgctgatacagtcacagatgctgtggagtttgtacta
ctgaactttactgagatgaataaactctgggtcagaatgcaacatcagggacctgctcga
gaaaaggagagacgggagaaagagaggggcgagcttcgtgaccttgttggaaagaacctt
cacgtgctgagtcagttagaaggtgtggaccttgatatgtacagagatacagttcttcct
agagtcttagagcagatagtgaactgcagagatgagattgcccaatattacctaatagac
tgtatcattcaagtttttcctgacgagtatcacttgcagactctagatgtacttcttggg
gcgtgtccacaacttcagccatcagttgacatcatgacagtgctttcccgtttaatggag
aggctgtcaaattatgctgccttaaatgctgaagtattaccttacttcctgcaagtggaa
gctttctcaaagttgaataatgcaattggaaaggtgatagaagcgcaagaagacatgcct
attctgagtgcagtaaccctatattcctcccttctcaagtttactcttcatgttcaccct
gatcggcttgattatgcggaccaagtgttgggatcatgtgttaagcaactgtccggaaaa
ggaaagattgatgacactcgtgcaacaaaggagcttgtttcgcttttaagtgctccctta
gagaagtataatgatgttgtcaccgcccttaaattaactaactatccccttgtagtggag
taccttgataccgaaacaaagagaataatggctactgttataattcgaagcattatgaaa
aacaatactcttattactacagcggagaaggttgaagcattgtttgaactgattaaagga
cttatcaacgatttggatgagccgcaaggtcttgaggttgatgaagatgattttgaggag
gagcagaattctgttgcgcgtctcattcacatgttatataatgatgacccagaagagatg
tttaagatagtcagtatcctgaagaagcatttcctgacaggagggccaaagcgcttaaag
ttcaccattcctccccttgttgtttctactctaaagctaatcaggcgattgccagtggaa
ggagacaatccttttggaaaagaggcttccgttactgctactaaaatattccaatttcta
aatcagattatcgaagcgctacctaatgttccatcacctgacctggcattccggttgtac
ttgcaatgtgctgaggctgcgaataagtgtgatgaagaaccaattgcatacgaatttttc
acccaggcatacatcttatacgaagaagaaatttcggactcaaaggcccaagtgaccgcg
ttacaacttataattggaactctgcaaaggatgcacgtatttggtgttgagaatagagat
acattaacgcacaaggctacagggtattcagcgaaacttctaaagaaacctgatcaatgt
cgagctgtttatgcctgttcacatttgttctggctggaagatcgtgagaccatacaagat
ggagaaagggttctactttgtctgaaacgagcgcttaaaattgcaaattcggctcaacaa
atggccaacaaagcacggggtagtacaggatctgttaccctcttcatcgagatactaaac
aagtacctttatttctatcagaaaggggttccacagataacagttgaatcagtggaaagc
ctgataaaactaatcaagaacgaagaatcgatggcatctgatccatctgctgaatcgttc
tttgcaagtacgcttcagttcatggagttcgaaaagcagaaagagggtgccattggtgag
agataccaggagatcaaagtatag
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