Arabidopsis lyrata (lyrate rockcress): 9320350
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Entry
9320350 CDS
T01578
Name
(RefSeq) paired amphipathic helix protein Sin3-like 1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9320350
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
9320350
REST complex
9320350
Heterochromatin formation proteins
Other heterochromatin formation proteins
9320350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
9320350
NCBI-ProteinID:
XP_020886518
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MKRIRDDVYASGSLASSRAQLYGQSPVPGSGDTEGGGRMAGGEITCQKLTTNDALSYLRE
VKEMFQDQRDKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPKGYEI
TLIEEEDHALPKKTVEFEEAINFVNKIKKRFKHDEHVYKSFLEILNMYRKENKEISEVYN
EVSILFEGHLDLLEEFTRFLPASLPSHSAAQHSRSQAQRYNDRGSGPPLIHQMQVEKERR
RERAVASRGDYNVERHDLNDDKTMVKMQREQRKRLDKENRARRGRDLDDREAEQDNLHHF
PEKRKSSRRAEGLEAYAGSASHSEKDNLKSMYNKAFVFCEKVKERLCSQDDYQTFLKCLN
IFSNGIIQRNDLQNLVSDLLGKFPDLMDEFNQFFERCESIDGFQHLAGVMSKKSFSSELL
SRPVKVEEKESEHKPDLEAVKETEQYKEEYMGKSIQELDLSDCECCTPSYRLLPADYPIP
TASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS
AARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILHKNLATAL
PVILTRLKQKQDEWKKCREEFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLNAKSLVAE
IKELKEKSQNEDDVLLSISAGYRQPINPNLEYEYFNRAIHEDLYKLVQFSCEELCSTKEQ
LSKVLRLWVNFLEAVLGVPPRDEGADLVEDVVIKPKTLDVNHSTSTNGESAVSSGADTAR
LASRKLKSAANGDENASSGPIKHGGIGLVNKDSTGKENLKDTDTAIRDGDTCSAVKPQKE
QETGNEADKRVVKPIPMDICERAVTSSLSIPSGGENSHCVVGKEDLAGSHEIQAKPSNTF
TDIHHDVDSIETVHSTQGGDVGTSIVLANGLRSDSSKGTRNSDEPEGSSRIEKEEGELSP
NGDFEDNFGVYEDLGVKSTSKPENSADAEVEADAEMENADDTDDDDGENASEGGEDASGT
ESGGEECSQDENREEENGEHDEIDGKAESEGEAEGMDSHFLEGDSELLPQSEHVLLSVRP
LSKHVAAVLHDERSKDLRVFYGNDDFYVLFRLHQILYERILSAKRNCSGGELKSKNSKDT
NSLDPYARFMRVLYRLLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYKLVKQLQAIVA
DEMDNKLLQLYEYEKSRKSGRVIDSVYYENARVLLHEENVYRLECSSSPSRVSIQLMDNI
IEKPEAYAVSMDPTFASYLQKEFLSTSSGKKEQGPAIVLQRNLRPYTGLYDLAALCKAME
GVEVVNGLECKMSCSSFKISYVLDTEDYFHRKKKKKKTEQLPQCNKDRVERFHRFLSA
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggataagagatgatgtctatgcctctgggtctctggcttcttctcgagcccaa
ttatatggacaatctccggtccccggcagtggtgacaccgaaggaggagggagaatggct
ggtggggaaattacttgtcagaaattgacaaccaatgatgccttgtcgtacctgagggaa
gtaaaagagatgtttcaagatcaacgggacaaatatgacaggttcctcgaggttatgaaa
gattttaaggctcaaagaaccgacacaggtggtgtcattgcaagagttaaggaattgttt
aagggacataataatttgatatatggattcaacacctttttgcctaagggttatgaaata
acgcttattgaggaggaagaccatgctctgccaaagaagactgttgaattcgaagaagcc
atcaattttgtcaataaaattaagaagcgattcaagcacgatgaacatgtctataaatct
ttcttggaaatcttgaatatgtaccgcaaggagaacaaggaaattagtgaggtgtacaac
gaggtatctattctttttgaaggccacttggatttgcttgaagagtttactaggtttctg
ccagcgtctttgccctctcattcagcagcgcagcatagccggagtcaggctcaacggtac
aacgaccgaggctcaggccctcctctaattcatcaaatgcaagtggaaaaggaacgccga
cgagaaagggctgttgcttcccgcggggattataatgttgaacgtcatgaccttaatgat
gataaaacgatggtgaagatgcaaagagagcagcggaagcgtcttgataaggaaaatagg
gcaaggaggggccgtgatttagacgatagagaagcagagcaagataacctacaccatttt
ccagaaaaaaggaagtcgtccagaagagctgaaggtcttgaagcatatgctggttctgct
tcccattctgagaaagacaatttgaaaagtatgtacaacaaagcattcgttttctgtgag
aaagtcaaggagcgactatgcagccaagatgattatcagacattcttgaagtgcctcaat
atttttagcaatggaataatccaaaggaatgatctgcaaaatttggtttctgatcttctt
gggaaatttcctgatctaatggatgagttcaaccagttcttcgagcgctgtgagagtatt
gatggatttcagcaccttgctggtgttatgagcaaaaaatcatttagcagtgaactgtta
tccagaccagtgaaggtggaagagaaagaaagtgaacataagcctgacctggaggctgtt
aaggaaaccgagcaatacaaggaggagtacatgggaaaatctattcaagagcttgatctc
tctgattgcgagtgttgcactcctagctaccggcttctccctgcggattatccgatacca
actgcgagtcagagatcagagctaggagctgaggttttaaatgatcattgggtgtctgtc
acttccggaagtgaagattattcttttaagcacatgcgcagaaaccaatatgaagagagc
ttgttcagatgcgaagatgatagatttgagttggacatgttgctggaatctgtgagctct
gcggccagaagtgcagaaagtttgttgaacatcatcacagagaagaaaataagtttttct
ggctccttcagaatcgaagaccattttacggccctaaatttaaggtgtattgagcgactt
tatggcgaccatggtcttgacgtgatcgacatattacataagaatttagccactgcactt
cctgtaatcctaactcgtttaaagcagaaacaagatgaatggaagaaatgccgtgaagaa
tttgataaggtctgggcgaatgtatatgcgaaaaaccattacaagtcacttgatcaccgc
agcttctacttcaaacaacaagattcaaagaacttgaatgcaaaatcattggtggctgaa
attaaggagctgaaagagaagtctcagaatgaggatgatgttctgttgtctatttctgct
ggttacagacaacccataaatcctaatcttgaatatgagtatttcaacagagctattcat
gaagacctgtacaaactagtccagttttcatgtgaggagttatgttctacaaaggaacag
ctcagtaaagttctgaggctttgggtaaatttcctggaggcagtgctgggtgttcctccc
agggacgagggcgcagatcttgttgaagatgttgtaataaaacccaagactctcgatgtg
aatcacagtacatctactaacggggagtctgctgtgagttctggagcagacacagcaagg
ttggcttctaggaaactaaaatctgctgccaatggagatgagaatgcttcatctgggcca
attaaacacggtggcataggtttggtaaataaggattcgacaggaaaagaaaatcttaaa
gatactgatacagccatcagagatggtgacacctgttctgctgtgaaaccccagaaagaa
caagagactggaaatgaagccgataaaagagttgtaaagcctatcccgatggatatttgt
gaaagagcagtcacctcgagtttatcaatcccaagtgggggagaaaacagtcattgtgta
gtaggaaaggaagatttggcaggttcacatgagattcaagccaaaccaagcaacaccttc
actgatattcatcatgatgtagatagcattgaaacggttcattcgactcagggaggtgat
gttggcacgtcgatagttttggcaaatggattaaggtctgattcttctaaaggtactagg
aattctgatgaacccgaaggttcctccaggattgagaaggaggaaggtgaactctcacct
aatggtgatttcgaagacaactttggtgtgtacgaagatcttggggtgaagtccacatcc
aaaccagagaattcagcagatgctgaagtagaggcagatgctgagatggagaatgcggat
gatactgacgatgatgatggtgaaaatgcttccgagggtggtgaggatgcatctggaact
gaatctggtggcgaggaatgttcacaggacgaaaacagagaggaggagaatggtgagcat
gatgagattgatggtaaagctgagagtgaaggggaagcggagggaatggattcacatttc
ttagaaggagacagcgagttgcttcctcagtcagaacatgttctcttatccgtcagaccc
ctttcaaagcatgtagcagcagttttacatgatgagaggtcaaaagatctccgagttttc
tatgggaatgacgatttttatgttctttttaggcttcaccaaatcctgtatgagagaatt
ttgtctgcaaaaaggaattgctcaggcggtgaactgaaatcgaaaaactcaaaggatacc
aattccttagatccttatgcgaggtttatgagagttttgtatcgattgcttgatggatca
gctgaaaataccaagtttgaggatgagtgcagagctataattgggaatcaatcatatgtg
ttattcacgttggacaaactgatatacaaattggttaagcagcttcaagctattgtagct
gatgaaatggacaacaagctacttcagctgtatgaatatgagaaatcccggaaatccgga
agggttatcgactcggtgtattatgaaaatgctagggtcctccttcacgaggaaaatgtt
taccggttggaatgttcatcctcgccatcacgtgtatctatccagcttatggataacata
atagagaagccagaagcgtatgcagtttctatggatcccacatttgcaagttatttgcaa
aaggagtttctttccacctcgtcaggaaagaaagagcagggacctgccattgtattacaa
aggaacctgcgtccatacaccgggttgtatgatcttgcagcactctgtaaagctatggaa
ggtgtcgaagtagtaaatggcttggaatgcaagatgtcttgctcttctttcaagatctcg
tacgtattggacacagaggattacttccacaggaagaagaagaaaaagaagactgaacag
ttaccgcaatgtaacaaagatagagtagaaaggttccataggtttctctcagcttaa
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integrated database retrieval system
