Arabidopsis lyrata (lyrate rockcress): 9322169
Help
Entry
9322169 CDS
T01578
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9322169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9322169
03051 Proteasome [BR:
aly03051
]
9322169
Membrane trafficking [BR:
aly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
9322169
Proteasome [BR:
aly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
9322169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Mod_r
Dsc3_N
CUE
TBK1_ULD
Ubiquitin_5
Ubiquitin_2
Rad60-SLD_2
UN_NPL4
HOIP-UBA
Motif
Other DBs
NCBI-GeneID:
9322169
NCBI-ProteinID:
XP_020887615
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MGGEGGDSSQPQTGEGAAVAVNIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQR
LIYKGRILKDDQTLLSYGLQADHTIHMVRGSAPSSAPPSAPAANAGNQTTAPSVTRGVGS
DNSSNLGGAGPGESLFPGLGFNPLGGGNAMAGLFGAGLPDLEQAQQQLAQNPNMIRDMMN
TPAIQNLMNNPEFMRSMIMSNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREM
MRNTDRAMSNIESMPEGFNMLRRMYENVQEPFLNATTMSGNAGNNTSSNPFAALLGNQGV
ATQGSVASNNSSTTNTGTGTIPNANPLPNPWGATGGQTTVPGRTNAAGDARSPGLGGLGG
LGGLGGLGMLGADSPLGATPDASQLSQLLQNPAMSQMMQSVFSNPQYMNQLMNLNPQLQS
MLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLLSQNRNAASQDAGQTGAATGTNN
NGGLDLLMNMFGSLGAGGLSGTNQPNVPPEERYATQLQQLQEMGFYDRAENIRALLATNG
NVNAAVERLLGSIGQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagagggaggagattcgagtcagccgcagactggagaaggagcagctgtcgcc
gtgaacatcaggtgctcaaatggcacgaaatttagtgtgaagacgagccttgattcgacg
gtggagtctttcaaagagttggtggctcagagcagcgatgtgccagctaatcagcagcgt
ttgatttataagggtcggatcctcaaggacgatcagactcttctcagttatggtttacag
gctgatcacaccattcatatggttcgaggctctgcaccttcttcagcaccaccttctgct
ccggctgcgaatgctggaaaccaaaccactgcacctagtgttactcgaggggttggttca
gataatagctcgaatctaggaggagcgggtcctggtgaatctttgttccctgggcttgga
tttaatcctttgggtggtggaaatgctatggctgggttatttggagctggtcttccggat
cttgagcaggcacagcaacaactagctcaaaaccctaacatgattagagatatgatgaat
acaccagccatccagaatcttatgaacaacccagaatttatgaggagtatgattatgagt
aaccctcaaatgcgtgagcttgtagatcgcaatcctgaacttggtcatgtgctcaatgac
ccaagcatccttcggcaaactttagaggcagcgagaaacccagagcttatgcgtgaaatg
atgcggaataccgatagggccatgagtaatattgagtctatgcctgagggatttaacatg
ctaaggcgtatgtatgaaaatgtccaggaacctttcttgaatgctactactatgtcaggg
aatgctggaaacaatacgagctccaatccgtttgctgctctcctgggaaaccagggggtt
gctactcaaggaagtgttgcttctaataactcttccacaacaaatactggaacggggact
attccgaatgcaaatccacttcctaatccttggggtgctacgggtggccagacaactgtc
cctggaaggaccaatgctgctggggatgcgagaagccctggacttggcggccttggtggt
cttggaggcctcggcggacttggtatgcttggagcggattcacctcttggtgccactcca
gatgcttctcaattgagccagttattgcaaaacccagccatgtcgcagatgatgcaaagc
gtattttccaatccacaatacatgaatcagcttatgaatcttaacccacaactccaaagc
atgctagattcgaatcctcagttgagggaaatgatgcagaatccagatttccttcgtcag
tttagttctccggagatgatgcagcaaatgatgactctacagcaatcgcttttatctcag
aatagaaacgcagccagccaggatgcggggcaaactggtgctgccacagggacgaacaat
aacggggggctggatttattgatgaatatgtttggcagtcttggtgctggcggcctgagt
ggcacaaaccaacccaatgttcctcctgaggagcgatacgctactcaattacaacagtta
caggaaatgggattctacgacagagcagagaacataagagcattgcttgcaaccaatggt
aacgttaatgctgctgtagaacgactcttggggagtatcggacagtag
DBGET
integrated database retrieval system
