Arabidopsis lyrata (lyrate rockcress): 9324211
Help
Entry
9324211 CDS
T01578
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9324211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9324211
Spliceosome [BR:
aly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
9324211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
9324211
NCBI-ProteinID:
XP_020890147
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDSVSKLQKS
QRYADIMQKVEEALGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDKYKLKF
QELESLVHHPIDYACVVKRIGNETDLTLVDLADLLPSAIIMVISVTASTTKGTALPEDVL
QKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLSALAKM
PACNVQVLGLKRKNLAGFSSATSQSRVGFLEQTEIFQSTPPGLRARASRLVAAKSTLAAR
VDATRGDPSGTSGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRLRKMKE
RYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKINAKVAK
KLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTFSKLKKI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttccttgctgatcttgacgagttatctgacaatgaagca
gaattggacgagaatgatggtgatgttggcaaggaggaagaagatgttgacatggatatg
gcggatttagagacacttaactatgatgatctcgatagtgtttctaagcttcagaaaagt
cagagatatgctgatattatgcagaaagtagaggaggctcttggagctgagaaaggaact
gtgttggaagatgaccctgagtacaagcttatcgtggattgtaatcagctttcggttgat
attgagaatgaaatcgttattgttcacaactttatcaaagacaagtacaagcttaagttt
caagagcttgagtccctggttcatcacccaattgattacgcctgtgttgtgaaaaggatt
ggcaatgagacggatttaactcttgttgatcttgctgaccttcttccatcagctattatc
atggttatttctgttactgcttcaaccacgaaagggaccgcactgccagaggatgtcctg
caaaaggtgttagaggcttgtgatcgggctcttgatcttgattctgctaggaagaaggtc
cttgagtttgttgaaagtaagatgggatctatcgcacctaatctttctgccattgttggg
agtgctgttgcagccaagctcatggggactgctggaggtttgtcagcacttgctaaaatg
cctgcctgtaatgttcaagttcttggcctcaagaggaagaatcttgctgggttctcgtct
gcaacatcacagtcccgtgtgggttttctggagcagacagagattttccaaagtactcct
cctggacttcgggctcgcgctagcaggctcgtggctgcaaaatcgactttggcagcaaga
gttgatgctactagaggggacccgtcagggacaagtggaaaagctttcagggaggagatc
cgtaagaagattgagaagtggcaagaacctcctcctgcaaggcagcctaagccacttcct
gttcctgattctgagccgaagaaaagaaggggtggtcgccgtctaagaaaaatgaaagaa
aggtatgcagtaacagacatgaggaagctggccaacaggatggcttttggtacacctgaa
gagagctctctcggtgatggactaggagaaggttatggaatgcttgggcaggcaggaagc
aacaggctgcgagtatccagtgttccgagcaagcttaaaattaatgctaaggtcgccaaa
aagcttaaagaaaggcagtatgcaggtggtgcgactacctctggtttgacatcgagcctg
gctttcactcctgtgcagggaatagagttgtgcaatcctcagcaagctttaggactaggc
agtgggactcaaagcacttacttctcagagtcaggaaccttctcgaagctgaagaagatc
taa
DBGET
integrated database retrieval system
