Arabidopsis lyrata (lyrate rockcress): 9324964
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Entry
9324964 CDS
T01578
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00052
Galactose metabolism
aly00511
Other glycan degradation
aly00531
Glycosaminoglycan degradation
aly00600
Sphingolipid metabolism
aly00604
Glycosphingolipid biosynthesis - ganglio series
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
9324964
09103 Lipid metabolism
00600 Sphingolipid metabolism
9324964
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
9324964
00604 Glycosphingolipid biosynthesis - ganglio series
9324964
00511 Other glycan degradation
9324964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9324964
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
9324964
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9324964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
CbtA
Motif
Other DBs
NCBI-GeneID:
9324964
NCBI-ProteinID:
XP_002888901
UniProt:
D7KR60
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAMTSRRSWPSTGRQTRHQLAFVLLLVLVAVGIYVPVLALPSLSLPPEIPGDEKMIMMSR
KFYIKDDSFWKDGNHFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQVYVPWNLHEPK
PGKMVFEGIGDLVSFLKLCDKLDFMVMLRAGPYICGEWDLGGFPAWLLSVKPRLQLRTSD
PAYLKLVERWWGVLLPKIFPLIYSNGGPVIMVQIENEYGSYGNDKAYLRKLVSMARGHLG
DDIIVYTTDGGTKETLEKGTVPVDDVYSAVDFTTGDDPWPIFELQKKFNAPGSSPPLSSE
FYTGWLTHWGEKIAKTDAEFTATSLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSEESD
YKPDLTSYDYDAPIKESGDIDNPKFRALQRVIKKYNVASHSIIPSNKQRKAYGPIKMQMT
TSLIDLVSMADPADVIISANPISMESAGQMFGFVLYESSYIAKKSGNILRIPKVHDRAQV
FVSCLSQDVGVLRYIGTTERWNNQPVSLPTIECTTNTSLFILVENMGRVNYGPYIFDEKG
ILSSVYLDGQILHGWKMIPIPFHNLNQVPNISFEMQHTKKRNVVGQKEPALFAGEFSINT
TEEIEDTYLSFNGWGKGVAFINEFNIGRYWPSVGPQCNLYVPAPLLKPGKNTLVIFELES
PHLELLLESVDQEDFVCGSYDSKVSQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacaagcaggcgtagctggccatcaacgggaagacaaacaagacatcaattg
gctttcgtgttgctcctggttcttgtagctgtcggaatctatgtgcccgtcttagctctt
ccttcattgtctctgcctcctgaaatacctggggacgagaagatgataatgatgtcaagg
aagttttatatcaaagatgacagtttctggaaagatgggaatcattttcagatcatcggt
ggtgatttgcactacttccgtgttcttcctgagtactgggaggatcggcttctaagagcc
aaggctttaggcctgaatactattcaagtatacgttccttggaatctgcatgaaccaaag
cctgggaagatggtttttgagggtattggtgatcttgtgtcctttctcaagctatgtgat
aaactagattttatggttatgctgcgtgctggaccttacatctgtggagaatgggatttg
gggggctttcctgcttggttactttctgtgaaaccacgtctccaactaaggacatcagat
cctgcatatcttaagttggttgaaagatggtggggtgttctgttaccgaagatatttcct
ctaatttacagcaatgggggtcctgttataatggttcagattgaaaatgaatatggttca
tatggaaatgacaaagcctatcttcgtaagctagttagtatggctaggggacacctgggg
gatgacattattgtgtacacaacagatggagggacaaaagaaactcttgagaaaggaact
gtccctgtagatgatgtctactcagctgttgatttcacaaccggtgatgatccttggcca
atatttgaattgcaaaagaagtttaatgctccaggaagctcacctccactttcctcggag
ttttatactggttggctaacacattggggtgaaaagatagcaaaaactgatgctgaattc
acggcaacttctcttgaaaaaatactgtctcgaaatggttctgctgtgctctatatggtg
catggaggaacaaactttggtttctacaatggtgcaaatactggctctgaagaatctgac
tataaaccagatctgacatcctatgactatgatgctcccattaaggagtctggtgacata
gataatccaaaattccgagctcttcagagagtgattaagaagtacaatgttgcatcacac
tccattatcccctccaataagcaacggaaagcgtatggtcctatcaagatgcagatgaca
acttcgctgattgatttagttagtatggcagatcctgcagatgtgatcatctccgccaac
ccaatttcaatggaatctgctggacagatgttcggatttgttttatatgagtcttcatac
atcgcaaagaagagtgggaatatactaagaatacccaaggttcatgacagagctcaagtt
tttgtttcatgtctttcccaagatgtgggagtactgagatacattggtacaactgagaga
tggaacaaccaacctgtttctcttccaactattgagtgcaccacaaacacgagcttattt
attctggttgaaaacatgggtcgtgtaaactatgggccatatatctttgatgagaagggt
atactgtcttcggtatatctagatggtcaaattctccatggatggaagatgataccaatt
ccgtttcacaacctaaatcaagtgccaaatatcagtttcgagatgcaacatactaaaaag
agaaatgtcgtcggtcaaaaggaaccagctctgtttgctggtgagttctctatcaacact
acagaagaaatcgaagacacgtacttatcattcaacggttggggtaaaggagttgctttt
atcaatgaattcaacattggaagatattggccgtctgttggaccacagtgcaacctctat
gttcctgcgccgcttcttaagcctggcaaaaatactttggtaattttcgagttggaatct
ccgcatctcgagcttttactggagtcagtggatcaagaagacttcgtatgcggttcttat
gattccaaagttagtcagtag
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