Arabidopsis lyrata (lyrate rockcress): 9325889
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Entry
9325889 CDS
T01578
Name
(RefSeq) ABC transporter B family member 10
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9325889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9325889
04147 Exosome [BR:
aly04147
]
9325889
04090 CD molecules [BR:
aly04090
]
9325889
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9325889
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9325889
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9325889
CD molecules [BR:
aly04090
]
Proteins
9325889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_22
RsgA_GTPase
DUF87
AAA_21
AAA_15
AAA_30
AAA_25
APS_kinase
nSTAND1
DUF815
Motif
Other DBs
NCBI-GeneID:
9325889
NCBI-ProteinID:
XP_002892589
UniProt:
D7KLH1
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MQPSTGDPAIVDMAVAEKEKKRPSVSFLKLFSFADFYDCVLMALGSIGACIHGASVPVFF
IFFGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVVILFSSWLEVACWMHTGERQAAKM
RKAYLRSMLSQDISLFDTETSTGEVISAITSDILVVQDAISEKVGNFLHFISRFIAGFAI
GFASVWQISLVTLSIVPLIALAGGIYAFVGTGLIVRVRKSYVKANEIAEEVIGNVRTVQA
FTGEEKAVSSYQGALKNTYNYGRKAGLAKGLGLGSLHFVLFLSWALLIWFTSIVVHKGIA
SGGESFTTMLNVVIAGLSLGQAAPDISTFMRASAAAYPIFQMIERNTEEKTGRKLGKVNG
DILFKEVTFNYPSRPDVVIFDKLNFVIPAGKVVALVGGSGSGKSTMISLIERFYEPTDGA
VMLDGNDIRYLDLKWLRGHIGLVNQEPVLFATTIRENIMYGKDDATSEEITNAAKLSEAI
SFINSLPEGFETQVGERGIQLSGGQKQRISISRAIVKNPSILLLDEATSALDAESEKSVQ
EALDRVMVGRTTVVVAHRLSTVRNADIIAVVGGGKIIESGSHDELISNLDGAYSSLLRIQ
EAASPNLNHTPSLPVSTKFLPELPIAETTLCPINQSINQPDTTKQAKVTLGRLYSMIRPD
WKYGLCGTLGSFIAGSQMPLFALGIAQALVSYYMDWETTQNEVKRISILFCCGSVITVIV
HTIEHTTFGIMGERLTLRVRQNMFSAILRNEIGWFDKVDNTSSMLALRLESDATLLRTIV
VDRSTILLENLGLVVTSFIISFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKA
YLKANMLAGESISNIRTVAAFCAEEKVLDLYSKELLEPSERSFRRGQMAGILYGVSQFFI
FSSYGLALWYGSILMEKGLSSFESVMKTFMVLIVTALVMGEVLALAPDLLKGNQMVASVF
ELLDRRTKVVGDTGDELSNVEGTIELKGVHFSYPSRPDVTIFSDFNLNVPSGKSMALVGQ
SGSGKSSVLSLILRFYDPTAGIIMIDGQDIKKLKLKSLRKHIGLVQQEPALFATTIYENI
LYGKEGASESEVMEAAKLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKN
PEILLLDEATSALDVESERVVQQALDRLMRNRTTVVVAHRLSTIKNSDMISVIQDGKIIE
QGSHNSLVENKNGPYSKLINLQQQQPHHP
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgtcgacaggcgatccagcaatagtggacatggcagtggcggagaaggagaag
aagcggccaagtgtatcatttcttaagctcttctcctttgctgatttttacgattgcgtt
ctgatggctcttggatccattggtgcttgcattcacggagcctccgttccagttttcttc
atcttctttggcaaacttatcaacatcatcggtcttgcttacctcttcccacaagaagct
tctcacaaagtcgccaagtactcgttggattttgtatatttgagtgtggtgatactcttc
tcatcatggttagaggttgcatgttggatgcatacgggagagagacaagcagcgaagatg
agaaaagcttatttgcggtcaatgttaagtcaagacataagcttattcgacaccgaaact
tcgaccggagaagtcatctccgccatcacctccgacatccttgtcgtccaagacgctatc
tccgagaaggtagggaatttcttgcacttcataagccggttcatagccggttttgcgatt
ggattcgcaagcgtatggcaaataagtctcgtcactctctccatagtcccactcattgct
ctcgccggcggcatctatgctttcgtcggcaccggacttatcgtccgtgtccggaaatca
tacgtcaaggccaacgagatcgcagaagaggtgatcgggaatgtgaggaccgtacaagcg
tttacgggagaagaaaaagcggtgagttcgtaccaaggagctttgaagaacacttacaat
tatgggagaaaagccggtttagctaaaggactaggactcggttcgttgcattttgttctg
tttttgtcttgggctttgctcatttggttcacaagcatcgttgttcacaagggaatcgct
agtggtggcgaatctttcacaaccatgctcaatgttgtcatcgctggcttgtctcttggt
caagcggctccggacatttccacattcatgcgagcgagtgctgctgcgtatccgattttt
cagatgattgaacggaacacggaggagaaaacaggtcgtaaactcgggaaagtaaacgga
gacattctattcaaagaagtgactttcaactacccgtctcgccctgacgtggtgatcttt
gacaagctaaacttcgtgatccctgcggggaaagtcgtggctcttgttggaggaagcggg
tctgggaaaagcaccatgatatctttaattgaacgattctacgagcctaccgatggggcg
gtgatgctagacgggaacgatatcagatacttggatcttaagtggctaagaggacatatt
ggtttggttaatcaagagcctgttctgtttgcaaccaccattcgcgagaacattatgtat
ggtaaagacgatgccacctctgaggaaattaccaatgctgcaaagctctcggaagccatc
tcattcatcaacagcctaccggaaggattcgaaacccaggtaggtgagagagggattcag
ctatccggcgggcagaagcagaggatcagtatttctagggcgatagtgaagaacccttcg
attctcttactcgacgaggcaacaagcgcactagatgcagagtcagagaaaagcgtgcag
gaagctttggacagagtgatggttgggaggacaacggtcgtggtggctcatagactctcc
accgtaagaaacgctgacatcatagccgttgttggaggagggaagatcatcgagtctgga
agccacgacgaactcatctccaaccttgatggagcttactcttccctccttcgtatccag
gaagctgccagccctaacttgaaccacactccaagcttaccagtcagtacaaaattcttg
ccagaactaccaatcgcagagacgaccttatgccccatcaatcaatctataaaccaacca
gatacgaccaaacaggccaaagtaacgttgggacgtctttactctatgatccgtccggac
tggaaatacggattatgtgggacgttaggttcctttattgcaggatctcaaatgccgctt
ttcgcgcttgggatcgcacaggctttagtatcttattacatggactgggaaacaactcaa
aacgaggtcaaaagaatctctatcctcttctgttgtggttccgtcatcactgtcatcgta
cataccattgagcataccaccttcggtattatgggtgagcgtctcactctccgagtccga
caaaatatgttttcagcgatcttgaggaatgaaatcgggtggtttgataaggtcgataac
actagctcgatgttggcattgcggcttgaaagtgatgcaactttgcttagaaccatcgtg
gttgatagatcgacaattctcttggagaatttaggtcttgttgtgacatctttcatcatt
tcttttatactaaactggcgtctcacacttgttgtcttggccacataccccttaattata
agcggtcatatcagtgagaaaattttcatgcaaggttacggaggaaacctgagtaaagca
tatttgaaggctaacatgttggctggagagtctataagcaacatccgaaccgtggccgcc
ttttgtgctgaggagaaggttctagacctttattccaaagagcttctagaaccttcagaa
cgttctttcaggcgtggacagatggctgggattttgtacggtgtttctcaatttttcatc
ttctcctcctacggccttgccctctggtacggatcgattttgatggagaaaggattatca
agtttcgaatctgtgatgaaaacattcatggttttgatagtaacggcgttagtaatgggt
gaagtgttggctctagccccagatctgcttaaaggaaaccagatggttgcttcggttttc
gagctattggaccgaagaactaaggttgttggagatactggcgatgagctgagtaatgtg
gaaggcacaattgagctcaaaggtgtccatttcagctacccttcacggcctgatgtgact
attttcagtgatttcaacctaaacgttccttctggcaagagcatggcgcttgtgggacaa
agcggatctggaaaaagttcggtcctttcactcattctccggttctatgatcctacagcc
ggaataatcatgatagacggacaagacatcaagaaactgaagttgaaatcactgcgaaaa
cacatcggtctggttcaacaagaaccggctctttttgcaacgactatctacgagaacatc
ttgtacggtaaagaaggagcttctgagtctgaagtcatggaagcagctaagcttgcaaac
gctcacagcttcatcagctctcttccggaaggttactcaaccaaagtcggtgaacgtggc
attcagatgtcaggcggccagagacagaggattgctatagctagagccgtccttaagaat
ccagagattctgctccttgatgaagccacaagcgccttggatgttgaatcagagcgtgtg
gtacaacaagcattggatcggctaatgaggaaccggactacggtggtggtggctcaccgg
ctatcaacaatcaagaactcagatatgataagtgtaatacaagacggtaagatcatagag
caaggcagtcacaatagcctcgttgagaacaagaatggtccgtactctaaacttatcaat
cttcagcagcagcagccccatcatccttaa
DBGET
integrated database retrieval system
