Arabidopsis lyrata (lyrate rockcress): 9327550
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Entry
9327550 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
DNA_ligase_OB_2
Motif
Other DBs
NCBI-GeneID:
9327550
NCBI-ProteinID:
XP_020870859
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MFSSSSQHRSAFDVLMSNSSAKRKRKFEETADAPSSRVNKTLVGISDSAKPKSDRVTELK
SKIGLLKKKPADFDPSKVSCWDKGERVPFMFLSLAFDLIALESGRIVITDILCNMLRTAI
ATTQDDLLSTVYLAANEIAPAHEGVKLGIGKGSSIIKAISEAFGRTKAQVKQQYTQLGDL
GLVAKGSRSSQTVIFMHKPLTVYNEEHSKPPPNIKNPLDEAATIVKEVFSVLPVYDLIVG
ALLTSGVWNLPKTCKLTPGVPVRPMLAKATTSVDLILEKFGDTVFTAEYKYDGERAQIHY
MEDGTIEIFSRHAERNTGKYPDVALALSRFKKPAVKSFILDCEVVAFNREEKKILPLQTL
STRAHKNVNVSDIKVGVYVFAFDILYLNGQLLIQENLNIRREKLYDSFEEDPGYFQFATA
LTSNDIGELQEFLKASIDIGCEGLMIKSLYSNATYEPAKRSNNWLKLKKDYMDSIGDSVD
LVPIAAFHGRGKRTGFFGAFLLACYDVDKEEFQSICKIGTGFSDAELQELSSSLFSKVIA
IPKQYYQVDDGLNPDVWLEPTEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRV
RKDKNPEEATSSDQIAEMYQAQKHNQPSNQGKGDDG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtcttcgtcccagcaccggtccgcatttgacgttcttatgtcgaattcttcc
gccaagaggaagaggaaattcgaggaaactgcagatgcgccgtcgtctagggttaacaaa
acccttgttggtatttctgattccgcaaaacccaaatcagatagggttaccgaactgaag
agcaaaattggattgctgaagaagaagccagctgatttcgacccgagcaaagtgtcttgt
tgggacaaaggggagagagttccgtttatgtttctgtccttggcttttgatctgattgca
cttgaaagtggccggattgtcatcactgatattctatgtaacatgttgagaaccgccatc
gccactactcaggatgatttgctttctacggtttatcttgcggccaatgagattgcacct
gctcatgaaggtgtcaaattgggaattggtaagggttcctccattattaaggcaatctca
gaagcttttgggagaactaaggctcaggttaagcaacaatatacacaattgggagactta
gggcttgtagcaaaaggaagccgttcctctcagactgtgatcttcatgcacaaaccatta
actgtatataacgaagagcattcaaagccacccccaaatatcaagaatcctttagatgag
gctgcaacgattgttaaagaagtattctctgtgcttcctgtctacgaccttattgttggt
gctcttctaactagtggtgtgtggaatcttcctaaaacttgtaaacttacaccgggtgtt
ccagttaggcccatgcttgcaaaagcaactacaagtgtagatctcatacttgagaaattc
ggggacaccgttttcacagctgaatacaaatatgatggtgaacgtgcacagatacattat
atggaggatggtacaatcgagatattcagtagacatgctgaaagaaacactggcaagtac
cctgatgttgctcttgcgttatcaaggtttaagaagcccgctgtaaaatcttttattctg
gattgcgaggttgttgccttcaacagggaggaaaagaaaattcttccgctccagactttg
agcactcgagcccataaaaatgtgaatgtcagtgatatcaaggttggcgtatatgtcttt
gcttttgatatattatatctaaatggccaactacttatccaggagaatctgaatattcgc
cgagagaagctatacgattcatttgaggaagatcctgggtatttccaatttgcaactgct
ctaacatccaacgatattggtgaattacaagagtttcttaaagcttctattgacattgga
tgtgaaggtttaatgataaagtcattgtactcgaatgcaacctatgagcctgcaaagagg
tcaaataattggctaaaactgaagaaggactatatggacagcattggagattctgtggat
ctagtaccaattgcggctttccatggacgtgggaaacgcacaggtttctttggtgcattt
ttactagcgtgctacgatgtcgacaaggaagaattccagagcatttgtaaaattggtact
ggattttctgacgcggagcttcaagagctgtcttccagtcttttctctaaagtgattgct
ataccaaaacaatactaccaagtcgatgacggtctcaatccagatgtctggttggagccc
accgaggtgtgggaagtgaaagcagctgacttgacaattagccctgtacatcgtgcagct
atcggaattgtggaccctgataagggaatttctctacgttttcctcgtttagtccgtgta
cggaaagacaagaatccagaggaagcaacatcatctgaccagattgctgaaatgtatcaa
gctcagaaacacaatcaaccaagcaatcaaggcaaaggtgacgacggttga
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integrated database retrieval system
