Arabidopsis lyrata (lyrate rockcress): 9329556
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Entry
9329556 CDS
T01578
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9329556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9329556
04147 Exosome [BR:
aly04147
]
9329556
04090 CD molecules [BR:
aly04090
]
9329556
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9329556
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9329556
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9329556
CD molecules [BR:
aly04090
]
Proteins
9329556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_30
AAA_23
AAA_7
nSTAND1
DEAD
AAA
P-loop_TraG
AAA_19
Mg_chelatase
APS_kinase
SpoIVA_ATPase
DUF87
Motif
Other DBs
NCBI-GeneID:
9329556
NCBI-ProteinID:
XP_002893495
UniProt:
D7KBV4
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MDNTEERSSNGNIQAETEAVEEKKKIKKESVSLMGLFSAADKLDYFLMLLGGLGACIHGA
TLPLFFVFFGKMLDSLGNLSTDPKAISSRVSQNALYLVYLGLVNLVSAWIGVSCWMQTGE
RQTARLRINYLKSILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTDHVLRYLSQF
IAGFVIGFLSVWQLTLLTLAVVPLIAVAGGGYAIIMSTISEKSETAYADAGKVAEEVMSQ
VRTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCSWALLLWYASLL
VRHGKTNGAKAFTTILNVIFSGFALGQAAPSLSAIAKGRVAAANIFRMIGNNNLESSERL
ENGTTLQNVAGRIEFHQVSFAYPSRPNMVFENLSFTIRSGKTFAFVGPSGSGKSTIISMV
QRFYEPNSGKILLDGNDIKSLKLKWLREHLGLVSQEPALFATTIASNIIFGKENANMDQI
IEAAKAANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSA
LDAESEKIVQQALDNITENRTTIVVAHRLSTIRNVDKIVVLRNGQVTETGSHSELMSRGG
DYATLVNCQETEPQENSRSIMSETCKSQAGSSSSRRISSSRRTSSFREDQVKTENDSNDK
DFSSSSMIWELIKLNSPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPFPNAIMR
DVEKVAIIFVGVGIVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENN
TGSLTSILAADATLVRSALADRLSTIVQNLSLTVTALALAFYYSWRVAAVVTACFPLLIA
ASLTEQLFLKGFGGDYTRAYSRATSVAREAIANIRTVAAFGAEKQIAEQFTCELSKPTKN
AFVRGHISGFGYGLSQFLAFCSYALGLWYVSVSIKNKETNFGDSIKSFMVLIVTAFSVSE
TLALTPDIVKGTQALGSVFRVLHRETEIPPDQPNSRMVSQIKGDIEFRNVSFVYPTRPDI
NIFQNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSHGNLCIDGQDIKTLNLRSLR
KKLALVQQEPALFSTTIHENIKYGNENASESEIIEAAKAANAHEFISRMEEGYKTYVGDK
GVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAH
RLSTIRKADTIAVLHKGRVVEKGSHRELVSIPNGFYKQLTNLQEVV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggataacacagaagaacgatcctctaatggaaacatacaagccgagacggaagcagtg
gaggagaagaaaaagataaagaaggaatcagtgtcattgatgggtttgtttagcgcagca
gataaacttgattactttctgatgttgctaggaggtttaggtgcgtgtatacatggcgct
acgcttccgctcttcttcgtgttctttgggaaaatgctagattctcttggaaatctttct
acagatcctaaagccatatcttcccgcgtttcacagaatgctctgtacttggtctactta
ggattggtcaatttggtatcagcttggatcggagtttcttgttggatgcaaacaggggaa
agacaaacagcgcgattgcgtataaattatctcaaatcgatcttagcaaaagacattact
ttctttgacacagaagctagggattcaaatctcatttttcacatctcaagtgacgcgatc
ttggttcaagatgcaattggcgataagacagaccatgttttgcggtatttatctcagttc
atcgcgggatttgtcatcggttttttgtcagtatggcaactcacgctgcttacattagca
gtggttccattaatagcagttgcaggaggaggatatgctataatcatgtccacaatctca
gagaagagtgaaactgcttatgctgatgcaggaaaagtcgcagaagaggttatgtcacag
gtgagaacagtgtatgcatttgtaggagaagagaaagctgtaaaatcttactcaaattct
ctcaagaaagctttgaaactcggtaaaaggagcggtcttgctaaaggtttaggagttgga
ttaacatatagcctcttgttctgttcttgggcattgcttttgtggtatgcaagtcttctt
gtacgccacggcaaaaccaatggtgcaaaagccttcacaacgatcctcaatgtcattttc
agtggattcgccttaggtcaagccgcgcctagcttatccgcgattgccaaaggcagagtt
gctgctgcaaatatattcagaatgataggaaacaacaatcttgaaagttctgagagacta
gaaaatggaacaacattgcaaaatgtagctgggaggattgagtttcatcaagtgtctttc
gcatatccttctagaccaaacatggtttttgagaatcttagtttcacaatacgttccggc
aagacttttgcatttgtcggtccaagtggttcagggaaaagcacaatcatatcaatggtg
caacgtttctatgaacctaactcagggaagattctcttggatggaaatgacatcaagagc
ctaaagctaaaatggttgagagaacaccttggattagtgagtcaagaaccagcattattc
gccacgactatagcttccaatattatttttggtaaagagaatgcgaatatggatcagatc
atagaagctgctaaagcagcaaatgcagattctttcattaaatcattacccaatggttac
aatactcaggttggagaaggaggaactcagctctctggaggtcagaaacagaggattgcc
attgctagagcagttctaagaaatccaaagatattacttttagatgaagcaacgagcgct
cttgatgccgaatcagagaagattgttcagcaagcacttgacaatatcacggaaaataga
acaacaattgttgttgcccatagattatctaccattcgaaatgttgacaagattgttgta
ttgagaaatggtcaggttacggaaaccggaagccactcagaattgatgtcaagaggagga
gattacgcaactcttgtcaattgccaagagacagaacctcaagaaaactcgagatcaatt
atgtctgaaacttgtaaatctcaagctggatcttctagttcaagaagaatttctagctca
aggaggacttcaagcttcagggaagaccaagtgaagactgaaaatgattcaaatgacaaa
gattttagctcatcttcaatgatatgggaacttataaagctgaattctccagaatggcca
tatgcattacttggctcaattggtgcagttcttgctggagcacaaactccattgttctct
atggggattgcttatgtgttaactgcattttattcgccttttcctaatgcgatcatgcgc
gacgtagaaaaggtagctattatctttgttggagttggaatagtaacagcacctatatat
cttctccaacattacttctatacacttatgggagagcgtcttacttctcgggttcgctta
tccttgttctcagcgattctttcaaatgagattggatggtttgatctggatgagaacaac
actggctcacttacttcaatcttggctgctgatgcaactttggtgaggagtgctctagcg
gatcgcctctcgacaatagtgcaaaacttgtctcttacagtcacagcattagcacttgcc
ttttattacagttggcgtgttgcagcagtcgtaacggcttgttttcctcttctcattgcc
gcttcacttactgagcaactatttctaaaaggctttggaggagactacacaagggcttac
tctagagcaacttcagtggcgcgtgaagcaattgcaaatataagaactgttgctgcgttt
ggtgccgaaaagcagatcgcggaacagtttacttgtgagctaagcaagcccaccaagaat
gcctttgttagaggtcatatctctggatttggatacggattatctcagtttcttgcgttc
tgctcctacgctcttggtctctggtacgtatcggtttcgatcaagaataaggagacgaat
tttggggatagtatcaaatccttcatggtgttgatcgtcacagctttctcagtttcagaa
acgcttgctttgaccccagatatcgtgaagggcacgcaagcacttgggtcagttttcagg
gttttacatagagagactgagatacctccagaccagcctaactcaagaatggttagtcag
atcaaaggagatatagagtttagaaacgtgagttttgtgtatcccacgagacccgatatt
aacattttccaaaacctaaacctccgagtttcagccgggaaaagtcttgcagtcgtgggg
cctagtggttctggaaaaagcacagtgataggactgatcatgagattctacgaccctagc
cacggaaatctctgcatcgatgggcaggacataaaaaccctaaacctacgtagcttgcgc
aagaagctagctttagtccagcaagaaccagctctgttttcaacaacaatacacgagaac
atcaagtacgggaacgagaacgcatcagagtcagagatcatcgaagccgcaaaggccgcg
aacgcgcacgagttcataagcaggatggaagaagggtacaagacgtacgtaggtgataag
ggagtacagttatcaggtggtcagaaacagagagtggctattgcacgggcggttttaaag
gatccttcagtgcttctccttgatgaggcaacaagtgctttggacacgagttcggagaaa
ctagtccaagaggcgctagacaagctgatgaagggacgaaccactgtattggtggctcat
aggctctcgaccataagaaaagcagacacgatcgctgtgttgcataagggaagagttgtg
gagaagggaagccatagagagctcgtttcaatacctaatgggttttataagcaattgacg
aatcttcaagaagtggtttga
DBGET
integrated database retrieval system
