KEGG   Alteromonas sp. Mac2: AV940_00370
Entry
AV940_00370       CDS       T05899                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
alz  Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:alz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alz03400]
    AV940_00370
Enzymes [BR:alz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AV940_00370
DNA repair and recombination proteins [BR:alz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AV940_00370
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 PhoH AAA_11 AAA_22 DUF1244
Other DBs
NCBI-ProteinID: AMJ89057
LinkDB
Position
77868..79883
AA seq 671 aa
MKLNDAQQSAVTFVSGPCLVLAGAGSGKTRVITNKIAHLVRNCDMPARYIAAVTFTNKAA
REMKERVAETLGKPEARGLKVCTFHTMGLTIIKAHIKELGLKPGFSLFDDKDSLALLTDL
TEDTIDGDKDQLSLLQSCISNWKNDLLLPEALLKQATSTGEREFAEAYKRYQDNLRAYNA
LDFDDLILLPTLLLKTSETARAKWQNKIRYLLVDEYQDTNTSQYELVKLLVGERSRFTVV
GDDDQSIYSWRGAKPQNLNLLQQDFPRLNVIKLQQNYRSSGRILHCANILIQNNPHLFDK
TLFSELQYGEPLRVIEAKNEEHEAERVVAELLAHKFMNRTKFKDYAILYRGNHQSRLFEK
LLMSNRIPYKISGGMSFFGRTEVKDIMAYLRLLVNQDDDNALLRVINTPSRGIGRVTLEK
LGNFANSLGVPMFEAATHPNLNSVLSDRAYDAVSGFARWIVEVADNANRGDTKDALRGMI
RSMSYEEWLYEQSASPKAAEMGMANVSTLFGWVTDMLEGNELDSPMNLTEVVNRLILRDM
MERGEDDGDGDQVQLMTLHASKGLEFPIVFLVGMEEGLLPHQSSVDEDNVEEERRLAYVG
ITRAQRELIFSLAKERRQFGEVINPEPSRFLYELPTDDLQWENQKPKESAEVRQQKGQSS
IANLRDMLGKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaaattaaacgatgcgcaacaatcagctgtcacctttgtgtctggcccctgcttagta
ttagcgggcgccggcagtggtaaaactcgggttattaccaacaaaattgcgcaccttgtc
agaaattgcgatatgccagcacggtatattgcagcggtaacctttaccaacaaagccgcc
cgagaaatgaaagagcgggtagccgaaaccctagggaagccagaggcacgtggtttgaag
gtatgtacctttcacaccatggggctaaccatcataaaagcccatattaaagagctaggc
ttaaagcctggtttctcattgttcgacgataaagactccttggcgctgttaaccgattta
accgaagacacgatagacggcgacaaagatcagctttcactattacaaagctgtatttca
aactggaagaacgacttgctgctgcccgaagcgttactaaaacaagccaccagtaccggt
gagcgagaatttgctgaagcgtataagcgctaccaagataacttacgcgcctataacgcc
cttgatttcgatgaccttattttattgcccacgctgctattaaaaaccagtgaaaccgca
cgggccaagtggcaaaataaaattcgctatttgctggtggatgaataccaagataccaac
accagccagtacgaactggtaaagcttttagttggcgagcgttcacgatttaccgtggtt
ggcgacgacgaccaatctatttattcatggcgcggcgctaagccacaaaacttaaacttg
ctacagcaagatttcccgcgcttgaacgtcattaaacttcagcaaaactaccgttcttca
gggcgaatactgcattgcgcaaacattcttattcagaacaacccgcacttgttcgacaaa
accctgttttctgaactgcaatatggcgaaccgcttagagtcatagaagcaaaaaacgaa
gaacacgaagctgaacgagtggtagcagaactgttagcgcacaagtttatgaaccgcact
aagtttaaagactacgctattttgtaccgaggaaaccatcaaagccgcttgttcgaaaag
ctactaatgagtaaccgtattccgtataaaattagtggcggtatgtcgttcttcgggcgc
accgaagtgaaagacatcatggcttacttgcgcttgttggtgaaccaagatgacgataat
gccttgctacgggtaattaacacgccaagccgcggcataggccgagtgacactagaaaag
ctgggtaactttgcgaacagcttgggcgtgcctatgtttgaagccgctacccatcctaat
ttaaacagcgtgttgtcggatagggcctacgatgctgtatcagggtttgctcgctggata
gtagaagtggctgataacgcgaatcgaggcgacactaaagacgcccttcgcggcatgatc
cgaagcatgagctacgaagagtggctatacgagcaaagcgctagccccaaagcggctgaa
atgggcatggcgaacgtaagtacgttgtttggctgggtaaccgacatgctagaaggcaac
gagcttgatagccctatgaaccttaccgaagtagtaaaccgccttattttgcgtgacatg
atggagcgaggcgaagacgacggtgatggcgaccaagtacagctaatgacactgcacgct
tctaaaggactagagtttccaattgtgttcttagtaggcatggaagaaggtttgttaccc
catcaaagcagtgtagatgaagacaacgtagaagaagagcgccgcttagcttatgtaggc
ataacgcgtgcgcagcgagaacttattttcagcttagccaaagagcgccgtcagttcggt
gaagttataaaccctgaaccaagccgctttctttacgagttgcccacagacgaccttcaa
tgggaaaaccaaaagccgaaagaaagtgccgaggtacgccagcaaaaaggccaaagcagt
attgctaatttaagagatatgctgggtaagaaatag

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