Alteromonas mediterranea DE1: amad1_12505
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Entry
amad1_12505 CDS
T02340
Name
(GenBank) small-conductance mechanosensitive channel
KO
K03442
small conductance mechanosensitive channel
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_12505
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_12505
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
AFV86001
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Position
2809371..2810210
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AA seq
279 aa
AA seq
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MEDFFGTNIDLSELTEKAISLVMTYTPKLLLAILTLVVGLWLVNRFVNLLDHRLGKKDPT
LNKFLCGLISAVLKVMLLISVASMIGIETTSFIAVVGAAGLAIGLALQGSLANFAGGVLI
LIFKPFRVGDTIEAEGYLGSVAEIQILYTVLNTFDNRRVVIPNGNLSNATLTNVSVYDKR
RCDMTFGIGYDDDIDKAKKILQRLFEEDERSLTEPAPRICVGGLGDNSVDLMFRPWVGTD
DLWPYYWDMQEKVKKAFDEEGISIPYPQRDVHLYNASND
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcttcgggactaatatcgatttatcggaattaaccgaaaaagcgatatca
ctggtgatgacttatacccccaaattgctattggctattcttactttggtggtgggtctt
tggttagtgaatcgttttgtaaacctattggatcaccgattaggtaaaaaggaccccacg
ttaaataagtttttatgcggacttataagcgccgttttaaaagtgatgttgttgatttct
gttgcctctatgataggtattgaaaccacctcatttatcgccgtagtgggtgcagcaggt
ttggcaatcggtcttgcattacaaggtagcctggctaattttgctggcggtgtgctaata
ctgatctttaaacccttcagagtgggtgacaccattgaagcagaaggttatctcgggtcg
gttgccgagatacaaattctttatacggtacttaacactttcgacaataggcgtgttgtt
atccccaacggtaatctgtctaatgccacgttgactaacgttagcgtatacgataaacgc
cgctgcgacatgacatttggtattggctacgatgatgatatcgacaaagcaaagaaaatt
ttgcaacgtctgtttgaagaggatgaacgctcattgaccgaacctgcacctaggatctgt
gtagggggattaggtgataactcggtcgatctgatgtttagaccttgggtcggcacagat
gatttgtggccttactactgggatatgcaggaaaaagttaaaaaagccttcgatgaagaa
ggtattagcatcccttatccgcagcgagatgtacatctgtataacgcaagtaacgattaa
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