Alteromonas mediterranea U7: I876_03540
Help
Entry
I876_03540 CDS
T02721
Name
(GenBank) RND family efflux transporter
KO
K18138
multidrug efflux pump
Organism
amae
Alteromonas mediterranea U7
Pathway
amae01501
beta-Lactam resistance
amae01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I876_03540
01503 Cationic antimicrobial peptide (CAMP) resistance
I876_03540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amae02000
]
I876_03540
01504 Antimicrobial resistance genes [BR:
amae01504
]
I876_03540
Transporters [BR:
amae02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I876_03540
Antimicrobial resistance genes [BR:
amae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I876_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
DUF4179
Motif
Other DBs
NCBI-ProteinID:
AGP88593
LinkDB
All DBs
Position
827727..830834
Genome browser
AA seq
1035 aa
AA seq
DB search
MLLSDVSVKRPVFATVINLLLIIFGVVAFSMLSLREYPDIDPPIVSVSTTYTGASANIVE
TRITQLLEDRISGIEGIKNVTSTSRNGRSDITIEFKLSRDIDAAANDVRERVSRALNNLP
DQADPPEVSKANSDESAVVWYNLRSTNLNTMELTDYAERVLVDRLSIVDGVARVQIGGGR
RYAMKVFLDRNAMAARGITVSDVEQVIRAENVELPAGEVESTDRNFEVRVARTFLSPDDF
SALTVAVGDNGYLVRLGEIAHVELTAEDDETEFRGDGVNMIGLGIIKQSKANTLDVARAA
KAQIAKIEATLPDNIFIVPSYDSSVFIEASIDEVYETLGIAMLMVVIVIYLFLGNIRATL
IPAVTVPVSIIAAFIVMYALGFSINLLTLLAMVLAIGLVVDDAIVVLENIYRRIEMGEPP
ILAAYRGAKEVGFAVIATTLVLISVFVPLVFLEGNIGRLFTEFALAIAAAVAFSSFTALT
LSPMMASKILKKRTRSSGFGSWMDKRFSQLENGYFTALGKTLHQPILMLLLLVIAVVALV
QLSEKVPSEFVPKEDRGNFFILMNAQEGASFESNAKNLEKIESILMPYRENGKINRLLVR
TPGFGGNAGIAIVGSADWDERDFSTFSLMDEISAKLNSVPDVRAFAIMRSGISGGGLGRP
VQFVLQGDTYENLVEWRDIVLEKAAQNPGLVRVDSDYKETSPQLLVNINRDRAADLGVSI
SDIGGTLEVMLGQRRVSTFLDRGEEYDVILEGIEEDFRSPNSIENLYVRSARTGELIPMD
NLLTFEEQATSSRLNRYNRMRAVTISANLAEGYTLGEALAYLENIVATELPDNVSIDYKG
ESQLYQEAGNSFIYVFMLALAVTYLILAAQFESWVHPLVIMLTVPLALVGAYIGLFFSGM
TINIYSQIGLVMLIGLAAKNGILIVEFANQLRDAGMEFEHALKRAAAQRLRPIVMTGFTT
VFSALPLVLASGPGAESRMVIGMVIFSGVLVSAFMTLFVVPTAYSWLARNTGSPLKRTNE
IERLEKTIPYKKGED
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttattgtcagatgtatctgtaaagcgcccggttttcgcaaccgttataaacttgctg
ctcattatctttggtgttgtcgctttttccatgttgagtctgcgagaatacccagacata
gaccctcctatcgtttctgtaagtacaacctatacaggggcgtcggccaatattgttgaa
acccgtattacgcagctgttggaagacagaatttcgggcattgaaggcattaaaaatgtc
acgtctacgtctcgaaatggccgctcagacattaccattgagttcaagctttcaagagac
atagacgcggcagccaatgatgtacgcgaacgcgttagccgggcattgaacaacttaccg
gatcaggccgatccacctgaagtatcaaaagctaactctgatgaaagtgcggtggtgtgg
tacaaccttcgcagcaccaacttaaatacaatggagctaaccgattacgccgagcgcgtg
ttagtggacaggttatcaattgtagacggcgttgctcgcgtgcaaattggtggtggtaga
cgctatgccatgaaggtatttctagaccgtaacgcaatggcggcgcgcggtattacggta
agtgatgttgaacaagttattcgtgcagaaaacgtagagttgccggcaggagaggtggaa
agtactgacagaaactttgaagtgcgggtggcaagaacttttctttctcctgatgatttt
tcagcccttaccgtggcggtaggcgataacggttacttggttcgccttggtgaaattgcc
cacgttgagttaaccgctgaagatgatgaaaccgagtttcgcggcgatggtgtgaatatg
atagggctgggtattattaagcagtctaaagctaatacccttgatgtagcgcgagcggca
aaagcgcaaatagccaaaatagaagccacgcttcccgataatatttttattgtgccaagc
tacgattcgtctgtgttcatcgaagcatccattgacgaagtgtacgaaaccttaggtatt
gccatgttaatggtggttatcgttatctacctattcttaggtaatattcgcgctacatta
attcccgccgtaacggtacccgtttccatcattgcggcgtttatcgtgatgtatgcgctg
gggttctctatcaacctacttactctacttgctatggtgctcgcgattggactggtggtt
gatgatgctatcgtagtactagagaacatttaccgacgcatcgaaatgggcgagccgcct
attttggcagcgtatcgcggcgctaaagaagtgggttttgcggttattgctaccactctt
gtactgatttcagtgttcgtacctttagtatttttagaaggtaacataggcaggctattt
accgaatttgccctagccattgcggcggctgtggcattttcaagctttactgcccttaca
ctctcgcccatgatggcatcgaagatccttaaaaagcgcactcgctcttcaggctttgga
agctggatggataagcgcttctcgcagttggaaaatggctatttcactgcgctgggtaaa
accttacaccagcctattttaatgctgcttttgttggtgattgcggttgttgcgctggtg
cagctatctgaaaaagtgcccagtgaatttgtgcctaaagaagacaggggcaatttcttt
atcttgatgaatgcacaggaaggggcaagctttgaaagtaacgccaaaaacctggagaag
attgaaagcatattaatgccttaccgagaaaacggaaagataaaccgcctgttagttcgc
acccctggtttcgggggcaatgcgggtattgccatagttggctccgcagattgggacgaa
cgcgactttagtacgttttctctcatggatgaaattagcgctaaactaaattctgtgcct
gatgtacgcgccttcgcaatcatgcgaagtgggatttcagggggaggtttaggccgtcca
gtacagttcgtattacagggcgatacctatgaaaacctggttgaatggcgagatatagtg
cttgagaaggcagcgcaaaacccaggcttggttcgcgtagattctgattataaagaaacc
tctcctcaactgctggtgaatattaaccgcgatagggctgcagatcttggcgtgtctatc
agcgatattggcggtacattagaagtgatgttagggcagcgccgtgtgtctactttcctt
gataggggagaggagtacgatgtaattctagaaggcatagaagaagatttcagaagccct
aatagtatagaaaacttgtatgtacgctcagcaagaaccggtgaattaattccgatggat
aacttgctaacgtttgaagagcaggccacatcctcaaggcttaatcgctacaatagaatg
cgggcagtcactatttcagcaaacttggcagagggatacacattaggtgaggcactagcc
tatcttgaaaacattgtcgctaccgaattgccagataatgtgtcgattgactacaaaggc
gaatctcagctttaccaagaggcagggaattcatttatttatgtattcatgctggcgctt
gccgttacctatctcatattagctgctcagttcgagagttgggtacatccgttagtgatc
atgctaacggtaccgctagccttagtgggggcttatattgggctgtttttcagcggcatg
acgattaatatctacagtcaaattgggcttgtaatgctaattggcttggcggctaaaaac
ggcatactcattgttgagtttgcaaatcagctgcgggacgccggcatggaattcgaacat
gcactaaaacgggctgccgcccagcgtttgcgacctattgtcatgaccggttttaccact
gtttttagcgctttgcctctggtgcttgcctcaggccccggcgctgaaagtcgtatggta
attggtatggtcattttttcaggtgtcttagtgtcggcctttatgacgttgtttgttgtt
cctacggcctacagctggctggcgcgcaacacaggatcgccgcttaagcgaaccaatgaa
atagaacgattagaaaaaacgatcccgtataaaaaaggggaagattaa
DBGET
integrated database retrieval system
