Alteromonas mediterranea MED64: I533_17285
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Entry
I533_17285 CDS
T02958
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I533_17285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amag03019
]
I533_17285
Enzymes [BR:
amag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I533_17285
Messenger RNA biogenesis [BR:
amag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I533_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGP83408
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All DBs
Position
3944960..3946279
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AA seq
439 aa
AA seq
DB search
MTRGEHGISREDISANALKVMYRLNGAGFESYLVGGCVRDILMGHEPKDFDVATNATPEQ
IKGLFKNCRLIGRRFRLAHIVFGREIIEVATFRGHHQESDEDENVPKAKVVAKRDSHGQL
VRDNVFGSIEEDAERRDFTFNAMYYSVADFTVTDFANGLAAIEKREVELIGDPETRYRED
PVRMLRAVRFAVKLGMRIEEKTAEPIKPLANLLQNIPPARLFEETLKLFLSGKGEETFLM
LHEYGLIEPLFPQLAPFLKDENSREMQFVRRVLANTDERINSNQRVTPAFLYAALLWYPV
EEQSQRLQSESGLNAHDAFNIASGEVISRQTQRIMIPKRFSTVVRDIWILQQRLPKRFGR
RAFQLLTHPKFRAGYDFLLVRGQVEGGDLLELAQWWTHFQHADNGKQKGMLNALRKSEGG
GKGGPRKRKRKPAKRGPDA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtggagagcacggtatatctcgtgaagacataagtgcaaatgcattgaaagta
atgtatcgccttaatggagcaggcttcgaatcgtatttggttggaggctgtgtgcgcgat
attttgatggggcacgagcccaaagacttcgacgtggcaaccaacgcaacgccagagcaa
attaaaggcctgtttaaaaactgtcgccttattggaagacgctttcgcttggcacatatc
gtgtttggtcgagaaatcattgaagtggccacatttcgcgggcaccatcaagagtcagat
gaagacgaaaatgtacctaaagcgaaagtcgtagcgaaacgggactctcacgggcagctc
gtaagggataacgtatttggctcgatagaagaagatgcagaacgccgcgactttaccttc
aatgccatgtactacagcgtggcagattttacagtaacagactttgcaaacggcttagcc
gctatagaaaagcgtgaagttgagcttattggcgatcctgaaacccgctaccgcgaagac
ccggtacgtatgttaagggctgtacgcttcgccgttaagctgggtatgcgtattgaagaa
aaaaccgcagaacccatcaagcctctggctaacctactgcaaaacattcctcccgctcgc
cttttcgaggaaacgctaaagctgtttttatctggcaaaggggaagaaacctttttgatg
ctgcacgagtacggactaattgagcccctattcccacagttggcgccattcttaaaagac
gaaaatagccgagaaatgcagtttgttcgccgcgtgctagctaataccgatgagcgtatt
aatagtaatcagcgtgttacgccggcatttttatacgccgctttactgtggtatccggtt
gaagaacagtcgcaacgtttacaaagcgaatctggcttaaatgcccatgatgcattcaat
attgcgtcgggcgaggttatttcccgtcaaacacagcgtattatgatccctaagcgcttc
tccaccgtggtgcgagatatctggattttacaacagcgtttaccaaaacgttttggacgc
cgcgctttccaactgctaacacatcctaaatttagagctggctatgactttttactagta
agaggccaggtagaaggtggcgacttactagagctagcgcagtggtggacgcacttccaa
cacgctgataacggcaaacagaagggcatgttaaatgcccttcgcaaaagcgaaggtggc
ggcaaaggcggccctcgcaaacgcaagcgtaaacccgctaagcgaggccccgatgcataa
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