Aquitalea magnusonii: DLM_3651
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Entry
DLM_3651 CDS
T05698
Name
(GenBank) sigma factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
amah
Aquitalea magnusonii
Pathway
amah02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DLM_3651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amah03021
]
DLM_3651
Transcription machinery [BR:
amah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DLM_3651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_38
HTH_28
HTH_7
TnsD
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBF87236
UniProt:
A0A3G9GRZ8
LinkDB
All DBs
Position
3909312..3909839
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AA seq
175 aa
AA seq
DB search
MSPPGPLAHNAAQSVDALYRQHHRWLEGWLRGKLGPSQDHAADLAHDTFVRVLHKQLFAS
LQAPRPLLATIARGLMIDLFRRQDLERAYLEVLAGQPESLVPSPEQQALVIETLLQVDAM
LAGLGSRPKQAFLLAQLDGMSYPDIARTLGVSVSSIKKYMVKALSHCLAYQLAQD
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctccaggtcctctggcccacaacgccgcccaaagcgtcgatgcactttatcgc
cagcaccatcgctggctggaaggctggctacgcggcaagctaggccccagccaggatcac
gcggccgatcttgctcacgataccttcgtgcgcgtgttgcacaagcagttgtttgcttca
ctgcaggcacccaggccattgcttgcgacgatcgcgcgcgggctgatgatagacctgttc
cgccgccaggatctggagcgcgcctatctggaagtgctggccggccagccggagtcgctg
gtgccgtcgccggagcagcaagcgctggtaatcgaaacgctgttgcaggtggatgccatg
ctggccgggctgggtagccgtcccaagcaggcgttcctgctggcgcaactggacggcatg
agctaccccgatatcgcccgtacgctgggggtgtcggtcagcagcatcaagaaatacatg
gtcaaggcactgagccattgcctggcctatcagttggctcaggactga
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