Actinomyces massiliensis: QU670_06435
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Entry
QU670_06435 CDS
T09278
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amas
Actinomyces massiliensis
Pathway
amas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QU670_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amas03019
]
QU670_06435
Messenger RNA biogenesis [BR:
amas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QU670_06435
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
WLD73101
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Position
1511611..1513245
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AA seq
544 aa
AA seq
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MRIVPLGGLGEVGRNMTVFEIDGQLLIVDCGVLFPEEDQPGVDLILPDFSYIEDRLDDVV
ALVLTHGHEDHIGGVPYLLRLRNDIPLVGSELTLAFVEAKLKEHRIRPVLRVVEEHEAVS
YEPFDLEFVAVNHSIPDAMAAMIRTDAGNVLITGDFKIDSLPIDGRITDLRSFARFGDEG
VDLFCVDSTNAEVPGMIGHENQIGPVLDNVFAESDQQIIVASFSSHVHRVQQVLDTAALH
GRRVALVGRSMVRNMGIAAERGYLRVPDGVLIDAKDISSLPPDERVLMATGSQGEPMAAL
SRMAHGEHRSIVLEPGDTVIFASSLIPGNENSVNRVINQLMRLGARVVHQGNAKVHVSGH
ASSEELLHVYNIVGPRSVMPIHGEVRHLVANGALAVKTGISPGNIMLAEDGVVVDLLDGR
SRIAGAVPCGYVYVDGSSVGEIDETELKDRRILAEEGFVAVYAVVETKTGTILAGPDIQA
RGVAEDTAVFDEILPDVTTALQEALDKGNADAHSLQQTMRRTLGRWIGRRLRRRPMIVPV
VIEA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtgcccctggggggcctcggcgaggtcggccgcaacatgaccgtcttcgag
atcgacggccagctgctcatcgtcgactgcggtgtcctgttccccgaagaggatcaacct
ggggtcgatctcattctgcccgatttcagctacattgaggaccgcctcgacgatgtcgtc
gccctggtcctcacgcacggtcatgaggaccacatcggcggcgttccttatctgctgcgc
ctgcgcaatgacatcccactggtcggctccgagctgactctcgccttcgtggaggccaag
ctcaaggagcaccgcatccgcccggtgttacgtgtggtcgaggagcacgaggcggtgtcc
tacgaacccttcgacctcgaattcgtcgccgtcaaccactccatccccgatgcgatggcg
gccatgatccgaaccgacgccggcaatgtactgatcaccggtgatttcaagatcgactct
ctgcccatcgacgggcgcatcaccgatctgcggtccttcgcgcggttcggcgatgagggc
gtggacctgttctgcgtggactccaccaacgccgaggtgcccggcatgatcggtcatgag
aaccagatcggcccggtgctcgacaacgtcttcgccgagtcggaccagcagatcatcgtg
gcctccttctccagtcatgttcaccgcgtccagcaggtactcgatactgcggcgctccac
gggcgccgtgtggccctggtgggccgttcgatggtgcgcaatatgggcattgcggccgag
cgcggctatctcagggtccccgacggcgtgctcatcgacgccaaggacatctcctccctg
ccgccggacgagcgcgtcctgatggctaccggatcccagggcgagcccatggcggcgctg
tcgcgcatggctcacggcgagcaccgcagcatcgtgctggagcccggcgacaccgtgatc
ttcgcgtcctccctgatcccgggcaatgagaactccgtcaatcgcgtcatcaatcagctc
atgcgactcggtgcgcgcgtcgtgcatcagggcaatgccaaggtccacgtctccggccac
gcgtccagtgaggagctgctgcacgtctacaacatcgtgggaccgcgcagcgtcatgccg
atccacggggaggtccgccacctcgtggccaacggcgcactggccgtcaagaccggtatc
tccccgggcaacatcatgctcgccgaggacggcgtcgtcgtcgatctgctcgacgggcgc
tcccgcatcgccggagcggtgccctgcggctacgtctacgtcgatgggtcctccgtcggg
gagatcgacgagaccgagctcaaggatcgtcgcatcctggcggaggagggcttcgtggcc
gtttatgccgttgtggagaccaagaccggcaccattctcgccggcccggacatccaggcg
cggggtgttgccgaggacaccgctgtcttcgacgagatcctgcccgatgtcaccaccgct
ctgcaggaggccctcgacaaggggaatgccgatgcccactccctccagcagaccatgcgc
cgcaccctggggcggtggatcgggcgtcgcctgcgccgtcgtcccatgatcgtgcccgtc
gtgatcgaggcctga
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