Agromyces mangrovi: GCM10025877_00010
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Entry
GCM10025877_00010 CDS
T09181
Symbol
priA_1
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM10025877_00010 (priA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_00010 (priA_1)
Enzymes [BR:
amav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025877_00010 (priA_1)
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM10025877_00010 (priA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
BDZ63063
LinkDB
All DBs
Position
complement(818..2776)
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AA seq
652 aa
AA seq
DB search
MPGGRVARVAIDSPLPQLDQLFDYAVPEALADRAVQGAAVRVPLRSGGRLARGWIVELAD
ESDFDGRLSEIDEVTTLVPVLAPEVWALARRVADRAAGSASDVLRLAIPSRYVRAEKAWV
KEHPPAAEPSAAPEATDAPGEPDALDQAVAQRARIALQALPGVEMLSGGATVGRWAVTLA
TAAAHVLAQGETTIVAVPDHRDLAQLEHALRDVVPEERITRVDAGQTGAARYRGFLDCLD
GTARVIIGNRSAAYAPATRLGLIALWDDGDPLFAEPLSPGVHARDAALVRQEQSGAALVF
AAHARSTEVQRLVGLGWCRQVEPERLARPRVVVDEAGSDPGTARIPSAAWRAARDASREG
PVLLQVARPGYAAALACARCGSPATCAACGGGLEQRGPRAAPTCRVCGTHANGFRCAECE
GDRLRMVSVGSERTAEELGRAFPGTRVIVSDGERPLTEVGSEPALVIATRGAEPVAAGGY
RAVLLLDGERMLLREALRVSEDCVRWWADAAALAADDAPVHLVGVRGRIATALATWQLAR
WAEEELAARRELRFPPAVRVATVKARGPVLERPVAEVRALGDGVDVLGPVPVDDGLERVV
VRMDYGRAQAVAASLRASMIRVATERRRPVQGQPVRRPPTLRVRFDDQEAFG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgggcgcgtcgccagggtcgcgatcgactcgcccctgccgcagctcgaccag
ctgttcgactacgccgttcccgaggccctcgccgaccgggcggtccagggcgccgcggtg
cgggtgccgctgcgcagcggtggccggctcgcgcgcggctggatcgtcgagctcgccgac
gagagcgacttcgacggccggctcagtgagatcgacgaggtcacgacgctcgttcccgta
ctcgcgcccgaggtgtgggcgctcgcgcgccgcgtcgccgaccgggcggcgggctccgcg
agcgacgtgctccggctggcgatcccctcgcgctacgtgcgggccgagaaggcgtgggtg
aaggagcatccgcccgctgcggagccctcggctgcgcccgaggcgacggatgccccgggc
gagcccgacgcgctcgaccaggcggtggcccagcgcgcccgcatcgcgctccaggcgctg
cccggggtcgagatgctgtcgggcggcgcgacggtcggccgctgggcggtcaccctcgcc
accgcggcggcgcacgtgctggcccagggcgagaccaccatcgtcgcggtgcccgaccac
cgcgacctggcgcagctggagcacgcgctgcgcgacgtcgtgcccgaggagcgcatcacc
cgggtcgacgcaggccagaccggagccgcccgctaccgcgggttcctcgactgcctcgac
ggcaccgcgcgcgtgatcatcggcaatcgttccgccgcgtacgcgcccgcgacgcggctg
ggcctcatcgcgctctgggacgacggcgatccgctgttcgccgagccgctcagcccgggc
gtgcacgcgcgcgacgcggcgctcgtgcggcaggagcagtcgggtgccgcgctggtgttc
gccgcgcacgcgcgcagcaccgaggtgcagcggctggtcgggctcggctggtgccggcag
gtcgagcccgaacggctggcccgtccgcgcgtggtcgtcgacgaggcgggcagcgacccg
ggcacggcgcgcatcccctctgccgcctggcgagccgcgcgcgacgcctcgcgcgagggc
ccggtgctgctgcaggtcgcgcgcccggggtacgcggccgcgctcgcctgcgcgcggtgc
gggtcgcccgcgacctgcgcggcgtgcggcggcggtctcgagcagcgcggtccgcgcgcc
gcgccgacctgccgggtgtgcggcacgcacgccaacgggttccggtgcgccgagtgcgag
ggcgaccgcctgcgcatggtgtcggtcgggtccgagcgcacggcggaggagctgggacgc
gcgttcccgggcacgcgggtgatcgtctccgacggtgagcgcccgctcaccgaggtcggg
tcggagcccgcactcgtgatcgccacgcggggagccgagccggtcgcagccggcggctac
cgcgcggtgctgctgctcgacggcgagcggatgctgctgcgcgaggcgctccgcgtgtcg
gaggactgcgtgcgctggtgggccgacgccgccgcgctcgccgccgacgacgcccccgtg
cacctggtcggcgtgcgcgggcgcatcgccaccgcgctcgcgacctggcagctcgcccgc
tgggccgaggaggagctcgccgcccgccgggagctgcgcttcccgcccgcggtgcgcgtc
gcgacggtcaaggcccgcgggccggtgctggagcggccagtggccgaggtccgggcgctc
ggcgacggcgtcgacgtgctcggcccggtgcccgtcgacgacgggctcgagcgcgtggtc
gtgcgcatggactacggccgggcgcaggcggtcgcggcgtcgctgcgcgcctcgatgatc
cgggtcgcgaccgagcgacggcggccggtgcagggccagcccgtgcgacgcccgcctaca
ctcagggtgaggttcgacgaccaggaggcattcggctag
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