Actinomadura madurae: LUW76_48070
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Entry
LUW76_48070 CDS
T08933
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LUW76_48070 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_48070 (ruvB)
Enzymes [BR:
amaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LUW76_48070 (ruvB)
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LUW76_48070 (ruvB)
RecFOR pathway proteins
LUW76_48070 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
Sigma54_activat
nSTAND3
Zeta_toxin
AAA_19
TsaE
AAA_3
DUF815
AAA_14
AAA_28
Sigma54_activ_2
RNA_helicase
AAA_17
NACHT
NB-ARC
IstB_IS21
AAA_33
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
URN01438
LinkDB
All DBs
Position
10174541..10175608
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AA seq
355 aa
AA seq
DB search
MSEDAERLVSADAVGAEEQVIEAALRPKKLADFVGQERVREQLALVLHSALRRGRTPDHV
LLSGGPGLGKTTLAMIIAAELGQPLRISSGPAIERAGDLAAVLSTLAEGEVLFLDEIHRL
ARPAEEMLYMAMEDFRVDVVVGKGPGATAIPLDIAPFTLVGATTRAGMLPGPLRDRFGFV
AHMDFYEPAELEVIVHRSARLLDVEIDGDAAAEVAGRSRGTPRIANRLLRRVRDYAEVRA
DGVITWESARAALALYEVDERGLDRLDRAVLESLMRKFGGGPVGLSTLAVSVGEEPETVE
VVAEPFLVRQGLLARTPRGRIATPAAWAHLGLAQPPTAPMAGTLFDLGEDTGAPE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatgcggagcggcttgtctcggctgatgccgtgggggccgaggagcaggtg
atcgaggccgcgctgcggccgaagaagctggcggacttcgtcgggcaggagcgggtgcgc
gagcagctggcgctcgtgctgcacagcgcgctgcggcggggccggacgcccgaccacgtg
ctgctgtccggcgggccggggctcggcaagaccaccctcgccatgatcatcgcggcggag
ctggggcagccgctgcggatctcctccggtccggcgatcgagcgcgccggcgacctcgcg
gcggtgctgtccacgctcgccgagggcgaggtcctcttcctggacgagatccaccggctg
gcgcggcccgccgaggagatgctctacatggccatggaggacttccgcgtcgacgtcgtg
gtcggcaaggggccgggcgcgaccgcgatccccctggacatcgcgccgttcacgctggtg
ggggccaccacgcgggcggggatgctgcccggcccgctgcgcgaccggttcggcttcgtc
gcgcacatggacttctacgagcccgccgagctggaggtcatcgtccaccggtcggcgcgg
ctgctggacgtggagatcgacggcgacgccgcggccgaggtcgccggccgctcccgcggc
acgccgcgcatcgccaaccggctgctgcgccgcgtccgcgactacgccgaggtccgcgcc
gacggggtgatcacgtgggaatcggcgcgcgcggccctcgcgttgtacgaggtggacgaa
cggggcctggaccggctggaccgtgccgtcctggagtcgctgatgcgcaagttcggcggt
ggaccggtgggcctgtcgacgctggccgtgtcggtgggggaggagcccgagaccgtggag
gtcgtcgcggagccgttcctcgtccggcaggggctgctcgccaggacgccgcgcgggcgg
atcgcgacgcccgccgcgtgggcgcacctgggcctcgcccagccgcccacggcgccgatg
gcgggtacgctgttcgacctgggagaggacaccggtgcgccggaatag
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