Alteromonas mediterranea DE: MADE_1001350
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Entry
MADE_1001350 CDS
T00747
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00052
Galactose metabolism
amc00511
Other glycan degradation
amc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
MADE_1001350
09103 Lipid metabolism
00600 Sphingolipid metabolism
MADE_1001350
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
MADE_1001350
Enzymes [BR:
amc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
MADE_1001350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Motif
Other DBs
NCBI-ProteinID:
AEA96419
UniProt:
B4S2K9
LinkDB
All DBs
Position
297803..300928
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AA seq
1041 aa
AA seq
DB search
MKTVAQIVAQNDWQNPVVFQRNRVGGHSPHHGYKTLEDALHNANAQKYLLNGEWDFCLFD
APEQVPESLLAATLSAEERAKWQSIVVPSNWQLKGYDKPIYCNVKYPFPVNPPIVPSENP
TGCYRTTFSVTSAQLSQRNHIVFEGVNSAFHLWCNGEYVGYSQDSRLPAEFDISNLLVEG
ENRLAAMVIRWSDGSYLEDQDMWWLSGIFRDVSLITKPRQHIQDVFVTPTLDACYRDATV
SVRTSIKAQLRCKVGIQLFDGDTTVTEQIVTGTNNKRVDEKGGWDDVVFQTLEVKEPKHW
TAETPYLYRIVVSLIDDSGNVIDREAYNVGFRNVEMKNGQLLVNGKAVLIRGVNRHEHHQ
VKGHAINEDDMLEDIKLLKQNNFNAVRTAHYPNHPRWYELCDEYGLYVVDEANIETHGMF
PMGRLSRDPLWAGAYMARFTQMVERDKNHPSIIIWSLGNECGHGPTHDAMYGWAKSFDPS
RPVQYEGGGADTTATDIIAPMYARVDTDVEDDAVPKWAIKKWLSLPGENRPVILCEYAHA
MGNSLGSFDEYWKAFKDYPRLQGGFIWDWVDQGLTKHTDSGDAFWAYGGDFGDTDNDRQF
CINGLLFPDRTPHPHLFEAKYCQQHLSFSLTEETDKWQLSVKSDYLFRHTDNELLRWQVL
ENGKPIIEGECPIYVAPQQAQTVSIAPEINFKAGALYHLNIDVVLANDCAWAKAGHVIDT
AQLALANKSGLIPFVSTANVANENAESGVTVKAENTTLLVSVKNNVFSFNSESGLLTSWL
HEDSEMLSAPLEDNFFRAPLDNDIGVSEVDNPDPNAWESRWRRAGIGKWDRICTSVDVEQ
STFDVRITSLFEYHYNDKLIAATKWVYTINHQAALTVEVEVLLDDSLPPMPRIGLQAAVP
APRSNEQERMRVTWQGLGPFENYPDRKAAARFGEHSLSIADLQTHYIFPTDNGLRSDCKQ
LNISGLRVNGQFCFSVSEYGQVQLDTAKHTSDLMPQDCVFVYIDHAHMGVGGDDSWSPST
HKAFLIEEKCYRYSVTFCAKV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttgcgcagatagtggctcaaaacgattggcaaaaccccgtggtatttcag
agaaaccgagtaggcggccacagcccacatcacggttataaaacgttagaagatgcccta
cataacgccaatgcgcaaaagtaccttttaaatggagaatgggacttttgtttgttcgac
gcgcctgaacaggtgcccgaaagcctgctggccgctacattaagtgccgaagagcgggca
aaatggcaatccattgttgtgccctcaaactggcaactaaagggctacgataaacctatt
tactgcaacgttaagtatcctttcccggtaaacccaccgatagtacccagtgaaaaccct
accggatgctaccgaaccacgtttagcgtaaccagcgcgcagttatctcaacgcaaccac
attgtatttgagggggtgaacagcgccttccacttatggtgtaacggtgagtatgttggc
tattcgcaagatagtcgtttaccggcagaattcgacatatccaatttgttggtcgagggc
gagaaccgcttagcggccatggtcatcaggtggtctgacggcagctacttagaagatcaa
gacatgtggtggctaagcggtattttccgtgatgtaagcttaattacaaagccacgtcag
cacattcaagatgtgtttgttacgcccacgctagatgcttgttatcgcgacgctactgtg
tctgttcgaacgtcaattaaagcgcagttacgctgcaaagtaggtattcagcttttcgat
ggtgacacgactgttaccgaacaaatcgttacgggcaccaacaataagcgtgtcgacgag
aaaggcgggtgggacgatgtcgtctttcaaaccctagaagttaaagagccaaaacactgg
acagcagaaaccccttacctttatcgcattgttgtatcgctgattgatgatagcggtaat
gtgatagaccgtgaagcctacaacgtgggtttccgaaatgttgaaatgaaaaatgggcag
cttcttgttaacggcaaggctgtgcttattcgcggtgtaaatcgtcacgaacaccatcaa
gtaaaaggccatgccatcaacgaagatgatatgcttgaagatattaaactattaaagcag
aacaacttcaatgcggtgcgcactgcgcattatcctaatcaccctcgctggtatgaactt
tgtgatgaatacgggctttatgtggttgatgaagccaatatcgaaacccacggtatgttt
ccaatggggcggctgtcccgcgacccgctatgggctggcgcttacatggcgcgttttacc
caaatggtagaacgcgataaaaaccaccccagtattatcatctggtcgttaggcaatgaa
tgtggtcatggccctacgcatgatgccatgtatggctgggcaaaatctttcgacccgtct
cggcctgttcaatatgaaggtggcggtgccgacactacggctaccgatatcatagcgcct
atgtatgcacgtgtagatactgacgtagaagacgacgctgtgcctaaatgggcaataaaa
aaatggctgtcgctacctggtgaaaaccggcccgttattttatgcgaatacgcccatgct
atggggaatagtttggggagttttgatgagtattggaaagccttcaaagactatccacgt
cttcaaggcggctttatttgggactgggttgaccaagggctgacgaaacacactgatagc
ggcgacgcgttctgggcttacggcggtgactttggcgataccgacaacgacagacagttt
tgtatcaacgggctgttattccctgacagaaccccacacccgcatttatttgaagcgaaa
tattgtcagcaacacctaagcttttcgttaacggaagagactgacaagtggcagcttagc
gtaaagagtgactacctgtttagacataccgataatgagctgcttcgctggcaggtgtta
gagaatggtaaacccatcatagaaggggagtgccccatttatgttgcaccacagcaagcc
caaaccgttagtatcgcgcccgaaatcaattttaaagccggcgcactctatcacctaaat
atcgacgttgtattagctaacgactgtgcatgggcgaaggcaggccatgttatcgatacc
gcgcagcttgcgctagctaacaaaagcgggctaattccttttgtctcaaccgctaacgtc
gcaaatgaaaatgctgagtctggagtgacggtcaaggcagaaaacaccaccttattagtc
agtgtgaaaaataacgtatttagttttaatagcgaaagtgggcttttaacctcgtggcta
catgaagatagcgagatgctcagcgcaccgctagaagataacttttttagagccccgctt
gataacgatattggtgtaagtgaagttgataaccccgacccaaatgcatgggagtcgcgc
tggcgccgtgctggtattggaaagtgggaccgcatctgcaccagtgtagacgtagagcag
agtacctttgatgtgcgcataacgtcgttatttgagtatcattataacgacaagctcatt
gccgcaaccaagtgggtttacaccattaaccaccaggcagcgttaaccgtagaggtagaa
gtgttattggatgatagtttaccgcccatgcctcgaattggtttgcaagccgcggtaccg
gcgccccgtagcaacgagcaagagcgaatgcgcgttacatggcaagggctagggcctttc
gaaaattacccagacaggaaagcggcagcgcgttttggtgagcactcgttgtcgatagcc
gatttgcaaacacactatatatttcctactgacaacggtttgcgtagtgactgtaaacaa
ttaaatattagtgggctaagagtgaacgggcagttttgctttagtgtaagcgagtacggc
caagtgcagctagatactgcaaagcatactagcgacctcatgccgcaagactgtgtgttt
gtgtatattgatcatgcacatatgggcgtaggcggcgacgactcgtggagccctagcacg
cataaagccttcttgatagaagagaagtgttaccgttattcggtgacattctgtgcgaag
gtatga
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