Amycolatopsis mediterranei U32: AMED_0860
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Entry
AMED_0860 CDS
T01269
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00240
Pyrimidine metabolism
amd01100
Metabolic pathways
amd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AMED_0860 (deoA)
Enzymes [BR:
amd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
AMED_0860 (deoA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
Glycos_trans_3N
PYNP_C
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ADJ42680
UniProt:
A0A0H3CX87
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Position
919536..920813
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AA seq
425 aa
AA seq
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MSAFAAVDVIRTKRDGGTLSDEQIDWVVDAYTRGDVAEEQMSALAMAIFLRGMTSAEISR
WTHAMIASGERLSLSVSRPTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTG
GTLDKLESIPGWRAALSTSEIQSQLEDVGAVVCAATSGLAPADKKLYALRDVTSTVESIP
LIASSIMSKKIAEGASGLVLDVKFGSGAFMKSLDQARSLASALTSIGADHGVPTTALLTD
MNVPLGRAVGNAVEVAESVDVLKGGGPADVVALTVALAREMLALAGLDVDPAAVLASGEA
YEVWCRMIAAQGGDPSAPLPTPSHVHVVTAPSSGVLASLDAYAVGVAAWRLGAGRARKED
PVQAAAGILCLAKPGDAVSEGDPLLELHTDTPDAVPAALSALEGGFTIASSAPEPGPIVV
ETIRS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgttcgcggcggtcgacgtcatccggaccaagcgggacggcggcacgctttcc
gacgagcagatcgactgggtcgtcgacgcctacacccggggtgacgtcgccgaagagcag
atgtcggcgctggccatggcgatcttcctgcgcgggatgacctcggccgagatctcccgg
tggacgcacgcgatgatcgcgtcgggggagcggctgtcgctttcggtgtcccggccgacg
gtggacaagcactcgacgggcggggtcggcgacaagatcacgctgccgctggcgccgctg
gtggcggcgtgcggcgcggccgtgccacagctgtccggccgcgggctcggccacaccggc
gggacgctcgacaagctggagtcgattcccggctggcgcgccgcactgtccacttcggag
attcaatcgcagctggaggacgtcggcgcggtggtctgcgcggcgacgtccgggctggcg
ccggcggacaagaagctgtacgcgctgcgggacgtcacgtccactgtggagtcgatcccg
ctgatcgccagctcgatcatgagcaagaagatcgccgaaggcgcgtccgggctggtcctg
gacgtgaagttcgggtcgggcgcgttcatgaagtcgcttgaccaggctcgttcgctggct
tccgcgttgacctcgatcggcgccgatcacggtgtcccgacgacggcgttgctgaccgac
atgaacgtcccgctggggcgggcggtcggcaacgcggtggaggtcgcggagtcggtcgac
gtgctcaaaggcggcggtccggcggacgtggtcgcgctgactgtggccctggcccgggag
atgctggcgctggccggcctcgacgtcgacccggcggcggtgctggcttcgggcgaggcg
tacgaggtctggtgccggatgatcgcggcccagggcggcgacccgtcggcgccgctgccg
acgccctctcacgtccacgtggtcacggcgccttcttcgggggtgctggcttcgctggac
gcgtacgcggtgggcgtcgcggcgtggcggctcggtgcgggccgcgcccgcaaggaggac
ccggtccaggccgcggcgggcatcctgtgcctggccaagccgggggacgcggtctccgag
ggcgacccgctgctggaactccacacggacacgcctgacgcggtcccggccgccctgtcc
gcgctcgagggtgggttcacgatcgcttcgtcggcgcctgaaccgggcccgatcgtcgtg
gagaccatccgtagctag
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