Apis mellifera (honey bee): 408884
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Entry
408884 CDS
T01057
Name
(RefSeq) transcription factor SOX-5 isoform X2
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ame
Apis mellifera (honey bee)
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ame03000
]
408884
Transcription factors [BR:
ame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
408884
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
408884
NCBI-ProteinID:
XP_016768145
BEEBASE:
GB41464
UniProt:
A0A7M7IFQ8
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Position
LG6:9518925..9667691
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AA seq
853 aa
AA seq
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MDLIGLRMSSKRKSPPTKLSEGGGGTGTVAGANEEEEDTTSSVTGGPGGEVAVGEEGPTT
PVDIEDCYPHQRGGDCESSGCSSPATTSEPDLRDSPSPSSNSLRTSKRQRIVLTGQEALA
YHYPPHHHHHHHHHHHHHHHTNTSSSSGGVVEPASSSECGSPPTPLTVDPYYPTHPHHNN
NNTVTQNNNNNNNNNNNGGNATTATTKRSMDDVLKRLTFKMNSESLSLQDDTSNNRRNSP
PPTSTPTGHNAHCGGVASVANSVPPSPPASGRMQNTDGQVQQDGASALHRVFCAESFAEK
ERRLSEMILQLQLLREQLLQQQDQSKSYPAHMTVDSQKQIEMQRLQTEHLKRQQEHIMQH
NIQELQAQMTKNQLSMSGPQSLMFLPFLEQLRGLPVQSPMPPPPVTSTSTTTNKHINSIA
NMISSHREGPSWATAHLAQMTTQMEKEASPTPISSAVAPTAAPLQDLDAPLNLTKPKSSS
SGATASSSSPGSDSHSTGAGSSGQQEQPLAATAPKLFPPGLPMPRNYLTTLPYAGLPPHL
SSISSPMGKVMAKDEAAGPGGAVAAAAVAAMEKHIAMHSIYAIPPSAGAMPPSPQTQRPG
GLKHSSSREEAAQEEQDYLSTPHMWREPGYKVPEDITEKAKMVRQQKREGENKPHIKRPM
NAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLHMEKH
PDYRYRPRPKRTCIVDGKKMRISEYKSLMRQRRQEMRQLWCRDSGPEMSFLSPVGSELGT
QHHPGTGAGPSARPSVSPPATMLNGGAAGPSSDHPSFYYPQDSLSPTDMMNFSPENSGSI
GGYDASPRHHDED
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatctgatcggattgaggatgtcctcaaagaggaagtcaccaccaacgaagctatcg
gagggcgggggcggcacgggtacagtggcaggcgcaaacgaggaggaggaggacacgacc
tcgtcggtgaccggtggtcccggtggcgaggtagccgtcggtgaagagggtcccaccacc
cccgtcgacatcgaggactgttacccccaccagaggggaggtgactgcgagtcgtccggc
tgctcgtcgccggcgacaaccagcgagcccgatctcagggactcgccctcgccatcgtcg
aattccttgcggaccagcaagcggcagaggatcgtgttgacggggcaggaggcacttgcc
taccattatcccccccaccaccaccaccaccatcatcaccatcaccaccaccatcaccac
acgaacacatcctcgtcgtcgggcggtgtcgtggaacccgccagctcctccgagtgcggc
tcgccccccacacccttaaccgtcgacccctattaccccacccatcctcatcacaacaac
aacaacaccgtcacccagaataataacaacaacaacaacaacaacaacaacggcgggaac
gccaccacagcgactaccaagagatccatggacgacgtgctgaagaggttaaccttcaag
atgaacagcgagtcgttgtcgctgcaggacgacacgagtaataacaggcggaacagcccg
ccgcccacctccacgccgaccgggcacaacgcgcattgcggaggcgtcgccagcgtggcg
aacagcgtgccaccctcgcccccggcatctggcaggatgcagaacacggatggacaagtg
cagcaggatggcgcgtcggccttgcacagggtcttctgcgcggagagcttcgcggagaag
gagcgcaggctatccgagatgatcctgcagctgcagctgctcagggaacaattgctgcaa
cagcaagatcagtcgaagtcgtatcctgcgcacatgaccgtcgactcgcagaagcaaatc
gagatgcagcggctgcaaacggagcacttgaagcggcagcaagagcacatcatgcagcac
aacatccaggagctacaggctcagatgacaaagaaccagctgagcatgtcggggccgcaa
tccttgatgttcctaccgtttctcgaacagctcagagggttgccggtgcaatcgcctatg
ccgccgccgcctgttacgtcgacgtcaaccaccaccaacaaacatatcaattcgatcgct
aacatgatcagcagccacagggaagggccaagctgggcgacggcgcatctcgcgcagatg
accacgcagatggagaaggaagcgtcgccgacgccgatctcttccgcggtggcgccgacc
gctgcccccttgcaggacctcgacgcgcccctcaacctcaccaagcccaagtcctcgtcg
tccggggccacggcgtcctcctcgtcgcccggaagcgactcccactcgaccggggccgga
agcagcggccagcaggagcaaccgctcgcggccaccgcgcccaagctcttcccacccggg
ctaccgatgcctcgaaattatctcaccacccttccctacgcgggcctcccgcctcacctc
agctccatctcctccccgatgggcaaggtaatggccaaagacgaggcggctggacctggg
ggtgcggtggcggcagccgcggtcgccgccatggagaagcacatcgcgatgcacagtatt
tacgcgataccgccgagcgctggcgcgatgcccccgtcgccgcagacccaacgacccggg
ggtctcaagcactccagttctcgggaagaggctgcacaggaggaacaggactacctgtcg
acacctcacatgtggcgggagccgggttacaaggtaccggaagacataacggaaaaagct
aaaatggtgagacagcagaagagggagggtgagaacaagccacatatcaagcggcctatg
aatgcgttcatggtgtgggccaaggacgagcgtaggaaaattttgaaagcctgcccggac
atgcacaactcgaacatatcgaagatactcggagctcgatggaaagcgatgtcgaattcc
gagaaacagccgtactacgaggagcaatcacggctgtcgaagctgcacatggagaagcat
cccgactacaggtacaggccgcggccgaaacgcacctgcatcgtggacgggaagaagatg
cgcatatccgagtacaagtcgctgatgcggcaacggaggcaggagatgaggcaactgtgg
tgccgtgacagcgggccagagatgagcttcctgtccccggtcggctctgaactgggcacg
caacaccatccggggaccggtgccgggccgtcggcgaggcctagcgtgtcccctccggcg
accatgttgaacggaggcgcggccggccccagttccgaccatccgtccttctattacccc
caggacagcctttcgccgacggatatgatgaacttctcgccagagaactcgggatcgatc
ggcggttacgacgcgagcccccgccaccacgacgaggattga
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