Apis mellifera (honey bee): 550829
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Entry
550829 CDS
T01057
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03020
RNA polymerase
ame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
550829
09124 Replication and repair
03420 Nucleotide excision repair
550829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ame03021
]
550829
03400 DNA repair and recombination proteins [BR:
ame03400
]
550829
Enzymes [BR:
ame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
550829
Transcription machinery [BR:
ame03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
550829
DNA repair and recombination proteins [BR:
ame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
550829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
550829
NCBI-ProteinID:
XP_026299925
BEEBASE:
GB48305
UniProt:
A0A7M7MRJ0
LinkDB
All DBs
Position
LG12:3077569..3085347
Genome browser
AA seq
1904 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKENQEQQSIERKPGHGGCGRYQ
PNLRRSGLDVTAEWTHVNEDSQEKKMALTAERAWEILKHITDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKANNELIRNEQAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHAPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRAVLRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMKVIQGVKDLLDKCIIVAGDDR
LSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPNKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDSEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITETGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKVGIEIPMAVGAGVMGTAGMFFGSVAT
PSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPG
SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPT
YSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSP
TSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtccgactctaaagcgcctctgcgaactgtaaaaagagttcaatttggtatt
ctttctccggatgaaatacgtcggatgtccgtcacagatggcggtattcgttttccagaa
acaatggaagggggtcgtccaaaacttggtggacttatggatccaagacaaggtgtcatt
gatagaaattctagatgtcaaacatgtgcgggtaatatgacagaatgtccaggacatttt
ggtcatatagatttggcaaagccagtttttcatgttggttttataacaaaaacaataaaa
attttaagatgtgtatgtttttattgttcaaaacttcttgttagtccgcataatccaaaa
attaaagaaattgttatgaaaactaaaggtcaaccacgaaaacgtcttacatttgtttat
gatttgtgtaaaagtaaaaacatttgtgaaggtggtgatgaaatggatattaacaaagaa
aatcaggaacagcaatctatagaaagaaaacctggacatggtggatgtggtagatatcaa
ccaaatcttcgaagatctggtttagatgttactgctgaatggacacatgtaaatgaagat
tcacaagaaaaaaaaatggcacttacagcagaaagagcttgggagattttaaagcatatt
acagatgaagaatcatttattcttggtatggatccaaaatttgcacgaccagattggatg
gtagtaactgttttacctgttccacctttatcagttagaccagcagttattatgtatggt
tctgctaaaaatcaagatgatttaacacataagcttgctgatattataaaagcaaataat
gaattaattagaaatgaacaagctggagcagcagctcatgtgatatcagaaaatataaaa
atgttacaatttcatgtagcaacattagttgataacgatatgcctggtatgccgagagct
atgcaaaaatcaggtaaacctctaaaagctataaaagcaagattaaaaggaaaagaaggt
agaatacgaggaaatttgatgggtaaacgtgtcgatttttctgctcgtactgttattact
cctgatcctaatttacgaatcgatcaagtaggtgtacctagaagcattgctcaaaattta
acatttcctgaaattgtaacgccttttaatatcgataaaatgcaagaacttgttagacgt
ggaaattcacaatatccaggagctaaatatattgttcgagataatggagaaagaattgat
ttgagatttcatccaaaaccatctgatctacatttacagtgcggttatagagtggaacgt
catatccgagatggcgatttagtaattttcaatcgacaaccgacattacataaaatgagt
atgatgggtcatagagtaaaagtcttaccatggagtacatttcgtatgaatcttagttgt
acatcaccatataatgccgatttcgatggtgatgaaatgaatttacatgccccacaatca
atggagactcgtgcagaagtagaaaatattcatgtaacaccgcgtcaaattattacgcca
caagctaataaaccagttatgggtattgtacaagatacacttactgctgtaagaaaaatg
actaaaagagatgtttttattgaaaaagaacaaatgatgaatattcttatgtttttacct
agttgggatggcaaaatgcctcaaccctgcatattaaaaccaaaacctctatggactggt
aaacaaattttttccttgattataccaggcaatgtaaatatgataagaactcacagcaca
catccagatgaagaagatgatggaccatacaaatggatttctcctggtgataccaaagtc
atggtggaacatggagaacttgttatgggtatactctgtaaaaaaactttaggtacatct
gctgggtcattacttcatatttgtatgttagaattgggacacgaagtctgtggacgattt
tatggaaatattcaaactgtaattaacaattggttacttttggaaggccattcaattggt
attggagatactattgctgatccacagacttatttggaaattcagaaagccatcaaaaag
gctaaagaagatgtaatagaagttattcaaaaagcacataatatggaattagaacctaca
ccaggtaataccttaagacagacttttgaaaaccaagtaaacagaattctgaatgatgct
cgtgacaaaactggtggctctgccaaaaaatcattgacagaatacaataatctaaaggct
atggtagtatcaggatcaaaaggatctaatattaatatttctcaagttattgcttgtgtc
ggccaacaaaatgtagaaggtaaacgtattccattcggttttcgtaaacgaacgttgcca
cattttattaaggatgattatggtcctgaatccagaggattcgtcgaaaattcgtatctt
gctggtttgactccatctgaattttattttcatgctatgggtggtcgtgaaggtcttatt
gatactgctgtaaaaactgcagaaactggttatattcaacgtcgtttaataaaagctatg
gaatctgtaatggtgcattatgatggaacagttagaaattctgtaggacaacttattcaa
ttacgttatggtgaagacggtttatgtggtgaaactgttgaatttcagaatctacctact
attaaattgagcaataaagcgtttgagaaaaaatttaaatttgatccaactaatgaaaga
tatcttcgtcgtattttcaatgaagatatcgttagagaaatgatgggatctggtgaagta
atatctgaattagaaagagaatgggaacagttaaacaaagatcgtgctgtacttcgagaa
atttttcctagtggagaatcaaaagtagtattgccttgtaatttgcaaagaatgatttgg
aacgtacaaaagatttttcatataaataagcgtgcacctactgatcttagtcctatgaaa
gtcatacaaggtgtgaaagatcttttggataaatgcattattgtagctggtgatgataga
cttagcaaacaagctaatgaaaatgctacattattattccaatgtttagtaagatctact
ttatgtacaaaatgtgtttctgaagaatttagattatccagtgaagcttttgaatggctt
attggagaaattgaaactagatttcaacaagcacaggtatcacctggagaaatggtaggt
gctttagctgcacaatcacttggtgaacctgcaactcaaatgacacttaatacttttcac
tttgctggtgtatcatcaaaaaatgtaactctcggtgtgccaagattaaaagaaattata
aatatcagtaagaaaccaaaagctccatcgttgactgtatttttgacgggagctgcagca
agagatgctgaaaaagcaaaaaatgtactttgccgattagaacataccacgttaagaaaa
gttacagcaaacactgcgatttattatgatccagatccacaaaatactgtaatcgcagaa
gatcaagaattcgtaaacgtttactatgaaatgcctgatttcgatccaaataaaatatca
ccatggttacttcgaattgaattagatcgcaaaagaatgaccgataagaaattaactatg
gaacaaattgcggaaaagatcaatgccggtttcggtgacgatctaaactgtatatttaat
gatgataatgccgaaaaattagttcttcgaattagaataatgaatagtgatgataacaaa
tttcaagatagcgaggaagaaactgttgataaaatggaggatgatatgtttcttcgatgt
attgaagcaaatatgcttagtgatatgacattacaaggtattgaagcaattggaaaagtg
tatatgcatttacctcaaactgatgctaagaaacgtatagttatcacagaaactggtgaa
tttaaagcaatagcagaatggttattagaaacggatggtacaagtttgatgaaagtattg
agcgaaagagatgttgatccagttagaacatttagcaatgatatttgtgaaatatttcaa
gtattaggtatagaggctgtgagaaaatcagtagaaaaggaaatgaacgctgtgttgcaa
ttttacggtctttacgtaaactatcgtcaccttgctttgctttgtgatgtaatgactgct
aaaggacatttaatggctataactcgtcatggaattaatagacaagacactggtgctctt
atgagatgttcctttgaagaaacagtagatgttttattggatgctgcgtctcatgcagaa
gtagatccaatgagaggagtatcagaaaatattatcatgggacaacttccacgtatagga
acaggatgtttcgatttgctattggatgccgagaaatgtaaggtcggtattgaaatacca
atggcagtaggtgctggtgtgatgggaactgctggaatgttctttggtagtgttgctaca
ccaagtatgagtcctcaaatgacaccttggatgggtgccacacctggttatggggcttca
agtatgtcacctgcattgggaagtggtatgacaccaggaggagcttgtttctcgccatct
ggagcatcagatgcttcagggctttctcctgcatattctgcatactctccgcaacctgga
agtccaggaagtccaggacctagcatgagtccatatccaatgtcaccagcaggtggcgct
tcaccaagttattcacctacatctccagcttatttgccaacgtcgcctagtataacaccg
tcaagtccaaactattcacctacaagtcccacttattcacctactagtccaaactattca
ccaacaagtccaagttattcaccaacgagtccaagttattcaccaacatcaccaagttat
tcaccaacaagtccaagttattcaccaacatcaccaagttattcaccaacaagtccaagt
tattcaccaactagtccaagttattcaccaacaagcccaagttattcgccaacgagtcca
agctattcgccaacaagtccaagttattctcctacaagtccaagttattcaccaacatcg
ccaagttattctccaacaagtccatcatattcaccaacatcaccgagttattcaccaaca
agtccaagttactcaccaactagtccaagttattcaccaagttcaccaaattacacacct
gcttcaccatcttattctccaacgagtccaagttattcgccaagttctccacaatattcg
ccagctagtccaagttattcaccaagtagtccaaaatattctccaacgagtccatcatat
tcacctacgtctccatcatttgctggaacttcgccacaatatacaccagcgagtccaaca
tattctccaacaagtccaacatattcaccaacgagtccatcatattcacctagttcacca
caacacacagcatcaggaagtacaagatattcacctagtagtccaaattattccccaact
agtccaacatattcacctacaagtcctcaatattcaccgtcgagtaccaaatattcacct
accagtccaacgtatacaccgactagtccaagttattcgccgacgagtccaacgtattcc
ccaccagtaccgggttattcaccaacgagccccacatattcccctgcatctccagcttac
gaaacagatgattaa
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integrated database retrieval system
