Apis mellifera (honey bee): 552225
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Entry
552225 CDS
T01057
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03013
Nucleocytoplasmic transport
ame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
552225
03015 mRNA surveillance pathway
552225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
552225
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
552225
mRNA cycle factors
P-body specific factors
552225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
552225
NCBI-ProteinID:
XP_003250077
BEEBASE:
GB54579
UniProt:
A0A7M7G9I3
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Position
LG10:complement(4922770..4926916)
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AA seq
623 aa
AA seq
DB search
MTMTEETQQSETAAQNEAQTSSPDVGKVKDSKKEKCRPMTKVVIRRLPPTMTQEQFLEQV
SPLPENDYLYFVKADMSMGQYAFARAYINFVEQQDIFMFREKFDNYVFIDSKGTEYPAVV
EFAPFQRLPKKRTGKKKDLKCGTIESDPYYISFLETRKNQEAESNISQPKTEYSYQPPDN
TPKKITTTPLLEYVKQRKQEKQRLRDEKREERRRRDLERRRTKEDPIISKVLKNQDLDKE
MCKDNKENREEKDKFSPKDIKNRIKKDDKLRDKISRDRDSKSITKGYRERIEDRNKDKDI
KHQRRHEDKKIYGRRDERDGIKDDRRFDGKDDRKYDFKEDIKDCRERKIEEKRGKSYEKM
RQEKKRLAETKKQNVDFNVDTENNVKLRCEDEEFQKKEFQVDSYENIKENEESMDDKEDI
KNSKEKEKQEINEKKVLIEDSVQDYEIKEQKKSDTILSTIESNKDIEKSKSNEDINKETN
EDNESEEKKDSKVTKRRSSLESGGEGGTGDGNCLRRHKSLDGGDQNNLQKTENEDKEKDK
KDPRLERRIRNKDRPAMEIYRPGMGKFSKQRLEREKSNTNDERASLSQSPTPNLNSNNLC
KSGKPGTEVRSMTFKRSISRDLV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactgaagaaacacaacagtctgagactgccgcacaaaatgaggcacaaact
agttctccagatgttggaaaagttaaagatagtaaaaaagaaaaatgccgacctatgaca
aaggtagtaatacggagattacctccaactatgactcaagaacaatttctagaacaggtt
tctccattgccagaaaatgattatctttattttgtgaaagctgatatgtctatgggacaa
tatgcttttgcccgtgcttatattaactttgttgaacaacaggatatttttatgttcaga
gaaaaatttgataattatgtatttatcgactctaaaggtacagaatatccagctgtagta
gaatttgcaccttttcaaagattaccaaaaaaaagaacaggaaaaaagaaagatttaaaa
tgtggtacaatagaatcagatccttattatataagcttcttagaaactcgtaaaaatcaa
gaagctgaatctaatatatcacaaccaaaaacagaatactcatatcaaccacctgataat
acaccaaaaaaaattacaaccactcctcttttggaatatgtaaaacaacgtaaacaagaa
aagcaacgtctcagagatgaaaaacgtgaagagagacgacgaagagacctagaacggagg
cgaacaaaggaagatcctatcatatctaaggtattgaaaaatcaagatcttgataaagaa
atgtgtaaagataataaagaaaatagggaagaaaaggataaattttcgcctaaagatata
aaaaatcgtattaaaaaggacgataaattacgtgataagatatcacgtgatcgagattct
aaatcaatcacaaaaggatacagggaaagaattgaagatagaaataaagataaagatata
aaacatcaaagacggcatgaggataagaagatatatggaagacgtgatgaaagagatggt
ataaaagatgatagaagatttgatggaaaagatgatagaaaatatgatttcaaagaagat
attaaagattgtagggaacgaaaaatagaagaaaaacgaggtaaaagttatgaaaaaatg
aggcaagaaaaaaaaagacttgcagaaaccaaaaaacagaatgtagattttaatgttgac
acagaaaataatgtaaaattaagatgcgaggatgaagaatttcagaaaaaggaatttcaa
gttgattcatatgaaaatattaaggaaaatgaagaatctatggatgataaagaagatatt
aaaaacagtaaagaaaaagagaaacaagaaattaatgaaaaaaaagttttaatagaagat
tctgtacaagattatgagatcaaagaacagaaaaaatcagatactatattatctactatt
gaaagtaacaaagatattgaaaaatcaaaatctaatgaagatattaataaagaaactaat
gaagataatgaatctgaagaaaaaaaggattcaaaagtcacaaaaagacgcagttcactt
gaaagtggaggggaaggtggtacaggagatggaaattgtttaagaaggcataaatctttg
gatggaggagatcaaaataatttacagaagactgaaaatgaagataaagaaaaagataaa
aaggatccacgattagaacgtcgaattagaaataaggatcgtcctgctatggagatttat
cgtcctggaatgggaaagtttagtaaacaaagattagaacgagaaaaatctaatactaac
gacgaaagagcatcactttcacaaagtcctactccaaatcttaattctaataatctttgt
aaatcaggaaaacctggaacagaagtacgttctatgacgtttaaacgtagtattagtcgt
gatttggtataa
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