Aeromonas media: B224_2304
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Entry
B224_2304 CDS
T03075
Name
(GenBank) rRNA -methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amed03009
]
B224_2304
Enzymes [BR:
amed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
B224_2304
Ribosome biogenesis [BR:
amed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
B224_2304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
Methyltransf_31
TruB-C_2
Methyltransf_25
Ubie_methyltran
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
AHX60935
LinkDB
All DBs
Position
complement(1811418..1812794)
Genome browser
AA seq
458 aa
AA seq
DB search
MPSHLSMEAFVASCRQPLRRSIRVNTLKITVSEFVARMAPLGWQLDPVPWCAAGFWLTRS
DESVPLGNTAEHLCGLFYIQEASSMLPVMALFASEQTRGDGMLLDAAAAPGSKTTQIAAL
MENRGMLIANEFSSSRLKVLSANIQRCGVTNVGMTHFDAKVFGQWLPETFDAILLDAPCS
GEGTVRKDEDALRNWSLESIDEIAAVQRGLLESAFHALKPGGVLVYSTCTLSLQENQAVC
QSLQEKFGDAFSFDSLADLFPGAEKACTPEGYLHVWPQIFDSEGFFVARLRKHHSVPNTM
FKPGKLGKFPFSPLPEKEAGPMLREIEGNFGIVPHGQLFGRNDEIWLFPHAFEQVQGKLR
FDRIGIKLAETFKKGYRLTHEWALAYGHEASKGCVELDASNAREFMMGRDVWPEQDAGTG
EVIVRYQGHPLGMGKWVGSRIKNALPRELVRDNNLFNA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccatcccatctctccatggaggcattcgtggcgagttgccggcagccgctgcggcgc
agcatcagggtcaacaccctcaagatcacggtatccgagtttgtcgcccgtatggcgccg
cttggttggcagctggatcccgtgccctggtgtgcagccggcttctggctcacccgcagc
gatgagagcgttccccttggcaacacggccgagcatttgtgcggcctcttctatatccag
gaagcgagctccatgttgccggtgatggcgctctttgccagtgagcaaacccgaggggat
ggcatgttgctggacgcggccgccgcccctggctccaagactacccagatcgcggcgctg
atggaaaaccgcggcatgctgatcgccaacgagttttccagcagcaggttgaaagtgctg
agcgccaatatccagcgctgcggtgtgaccaacgtcggcatgacccatttcgatgccaag
gtctttggccaatggctgcctgaaaccttcgacgccatcctgctcgacgccccctgctcc
ggcgaggggacggtgcgaaaagatgaagacgcgctgcgcaactggagtctcgagagcatc
gacgagattgccgcggtgcagcgtggcctgctggagagcgcttttcacgccctcaaaccc
ggcggcgtactggtctactccacctgcaccctgagcctgcaagagaatcaggccgtctgt
cagtcgttgcaggagaagttcggtgatgccttcagctttgactcgttggccgatctcttt
ccgggagcggagaaagcctgtacaccggagggatacttgcacgtttggccccagatcttc
gacagtgaaggatttttcgtcgcccggttgcgcaagcatcactccgtgcccaacaccatg
ttcaaaccgggcaagctcggcaagttccccttctcgccgctgccagagaaagaggctggc
cccatgctgcgggagattgaagggaattttggcatcgtgccccatggccaactgtttggc
cgcaatgacgagatctggctcttccctcacgccttcgagcaggtacaggggaagctgcgc
ttcgatcgcatcggcatcaagctggctgagaccttcaagaagggatatcgattgacccat
gaatgggctctggcttacggccatgaggcgagtaagggatgcgtcgagctggatgcctcc
aatgcccgtgaattcatgatgggacgagatgtctggccagagcaggatgccgggactggg
gaagtgatcgttcgttaccaggggcacccgctcggcatggggaaatgggtggggagtcgc
atcaagaatgccctgccccgggagctggtacgggataacaacctgttcaatgcgtga
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