Anopheles merus: 121600079
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Entry
121600079 CDS
T08889
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
amer
Anopheles merus
Pathway
amer03022
Basal transcription factors
amer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121600079
09124 Replication and repair
03420 Nucleotide excision repair
121600079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amer03021
]
121600079
03400 DNA repair and recombination proteins [BR:
amer03400
]
121600079
Transcription machinery [BR:
amer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121600079
DNA repair and recombination proteins [BR:
amer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121600079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
121600079
NCBI-ProteinID:
XP_041784313
LinkDB
All DBs
Position
3L:complement(13359681..13361606)
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AA seq
501 aa
AA seq
DB search
MSEAKSSQGNSGTTSKGSSSSGSSLITKPANLECKDLEEYLKSRPPEVLEKLYNYPAICL
AVYRELPEIARQFVIRILFVEQPIPQAVVSSWATQVYAKENTSVSQVLTELGVWRSAAYP
GGLAAWELCPTFKKNLKIALLGGGRPWSMSNALDPDQKSRDIDFLDTYAMSRWRCVLHYM
VGAGSSKGMEGEGISPDAVRILLHANLMKRDESDGSPVITRQGFQFLLLDTQAQVWHFML
QYLDTCEARGLNLPECLSMLFQLSFSTLGRDYSSEGLSPGLLTFLQHLREFGLVYQRKRK
EGRFYPTRLAHNITSKNATHATTLAQDQESNATKDKGYIIVETNYRVYAYTDSNLQVALL
GLFTELLYRFPNLVVGVLSRDSVRQAFRGGITAEQIISYLEQHAHPTMLTVEQAINSKSS
LPPTVVDQIKLWENERNRFTYTEGVVYNQFLSQADFITLRDYAQSIGVMIWQNERIRTMV
VTKNGHDDVKKFWKRYSKGGS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggctaagagcagccaaggtaacagcggcaccaccagcaaaggatcgtcctcg
tccggctcgtcgctcatcaccaaaccggctaatttagaatgcaaagatttggaagagtat
ctgaaatcgcgaccgcccgaggtgctggaaaagctgtacaactaccccgccatctgtctc
gccgtttatcgcgagctgccagaaatagcgcgccaattcgttataagaattctgttcgtc
gagcaaccgattccacaagcggtcgtgtcctcgtgggcaacacaggtctacgcaaaggaa
aacacatccgtctcgcaggtgctgaccgagctgggtgtatggcggagcgcggcctatccg
ggcgggctggccgcctgggagctgtgcccaacgttcaagaagaacctcaagatcgcactg
ctgggcggcggccggccctggtcgatgtcgaacgcgctcgatccggaccagaagtcgcgc
gacatcgacttcctggacacgtacgccatgtcccggtggcgctgcgtgctgcactatatg
gttggtgccggtagctccaagggcatggagggggaaggcatctcgccggacgcggtgcgc
atcctgctgcacgccaatctgatgaagcgggacgagtcggacggcagcccggtcatcacc
cggcagggcttccagtttctgctgctcgacacgcaggcccaggtgtggcactttatgctg
cagtatctcgatacgtgcgaggcgcgcggcctcaacctgcccgagtgtctgtcgatgctg
ttccagcttagcttcagcacgctcggccgggactacagctccgaggggctcagcccgggc
ctgcttaccttcctgcagcatttgcgcgagttcgggctggtgtaccagcggaagcgcaag
gagggccggttctatccgacgcgcctggcgcacaacatcacctcgaaaaacgctacccac
gccacgacgctcgcccaggaccaggaatcgaacgcgaccaaggacaagggctacatcatc
gtcgagacgaactatcgcgtgtacgcgtacaccgactcgaacctgcaggtggccctgctc
ggcctgttcaccgagctgctgtaccggtttcccaacctggtggtcggtgtgctgtcgcgc
gattccgtccggcaagcgttccggggcggcattacggcggagcagatcatcagctacctg
gagcagcatgcccacccgacgatgctgacggtggagcaggcgatcaacagcaaatcctcc
ctgccgcccacggtcgtcgatcagataaagctgtgggagaacgaacggaaccggttcacc
tacaccgagggcgtcgtgtacaatcagttcctgtcgcaggccgactttatcacgctgcgc
gattacgcccaatcgatcggcgtgatgatctggcagaacgagcgcatccgcacgatggtg
gtcacgaagaacgggcacgacgatgtgaaaaagttctggaaacggtactccaagggtggc
agttag
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