Astyanax mexicanus (Mexican tetra): 103022875
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Entry
103022875 CDS
T05042
Symbol
pom121c
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103022875 (pom121c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103022875 (pom121c)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103022875 (pom121c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
103022875
NCBI-ProteinID:
XP_022537212
Ensembl:
ENSAMXG00000009738
ENSAMXG00000016708
LinkDB
All DBs
Position
20:complement(35404754..35418511)
Genome browser
AA seq
1237 aa
AA seq
DB search
MSPEDKRRLAFTSAALLAVALFLLVLSYIPTYLYILLFFVGFCGVGYYKAEEFRLFDRLG
LNPRRGLSVPPALLRCLPGGSLRGAPASVRNKNRANKGDARNSLAASVERHFVGSSVQRR
EAFSDTAFSPRDLLMGSYLAKPESPHGAGRPVGPSGLQAHPGEQLRERLVRPNHGVPTPN
RRLSFGDPVGTTGRFTITPQRHYPLQQTGTSSVGVLPPAQWDGFRKKNVLTQRNTPTHSP
VTVKIARPDSASRSTFFDQLNSPGALTSPGFGVQADPCSRETVLNVLRESRKRDVDDEDK
SHATGQKSKRRRHDSSGSSQSAFETLLANGAPSQLVPKPGSLKRGMNTSVLEESTMKRSR
TSSISSVSGAPTSFGVPGSVRNPIRSSYSSSQGYPQRRAASSLSLSPLTSPASSRCQTPE
RAAKKPREEDITSPSSASSMKSDKTATDVVPGSGKRSPAPEATVSTISDSGGSSGKRKRK
IQLVSTRRGDQISMPPPPELGYTVTVKDLDMEKKAALSQIQKVLEEPEPEKPAPASAPAP
VPTPSISLFSQVAPASSTAANPGVSAPSVAPLSAPATSTTISAPAPTPTIDLTVAPASTA
SPAATLISAAAAAATTTTSSTLAAPAMSQANPLLESLKNMRNNSQLPSPLAATPAAPATP
VMAKTPASLAQTGPGSGVLKSEPALAPPQPSVSTSLAPATHSASSTPSAFAQILAQPLHP
SSITFTPPSGSTLFSLKPQTAPASAAPTPTASITPTVAVSSAANPAPSGFKPIFGAATTA
PATAAEVKPTQPVFKPIFGSATEGGLSAFGQPTTTTLSSAPASQSSTLLFGSLINTQPAA
ASVASSTPTTQTSSNSLFGSWPSASAAPAPAPAVNSTFQFGAQAAATPSSGLGAATTSSS
GSANMFQFGAVKPTQTAPAAATQSTFMFGQTPAAQNSTTTTFGGFGLTNNTATTTASAPT
TQATFGSSTFSTSTSFPNATTQAPAAAKPFTFGAGSGASAAAAPFPFGAPASTAAPSFGT
QSQTTFGSTTAAPTFGTQSQPTFGGTTAAPSFGTQSQPTFGGTTAAPSFGTTTQPTFGNA
SSGFSFANTTTPSVAPAFGATTQTAAPVPAPTFTFGAASATPQNNAQSAPAPAASGGFNF
TASLSGAQFATPAPAAQTQGFPFGNNNADNKLTFGTSTPAFGNSSTPIPFGSPGTPVPGF
TASPFNTPSATFSIGAGSKPSGSRQRLQARRQHVRKK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgaagataagcggcggctagctttcacctcagctgcgctgctcgcggtcgct
ctgtttctcctggtcctgagctacataccgacatatctgtatatactgctgtttttcgtt
ggtttttgtggtgttggatattataaagcggaggagttccgcctcttcgacagactgggc
ctcaatccccgccgtggcctgagtgtgccgccggctctgctgcgctgcttgcccggcggg
tctctgcggggagcgccggcgagcgtccggaacaagaaccgcgccaacaaaggtgatgcg
aggaactcgctagcggcttctgtggagcggcacttcgtagggagctcagtccagcggaga
gaagcgttcagtgacaccgcgttcagcccgcgggacttactcatggggagctacctcgct
aagccagaaagtccccacggcgcggggaggcctgtcggaccctccgggctccaggcgcac
cccggggagcagctccgggagaggctggtccggccgaaccacggagtccccactccgaac
cggcggctctctttcggagacccagtaggtaccacagggaggtttactatcaccccccag
agacattacccactgcagcagacagggacatcttcagtaggtgtgctgcctccagcgcag
tgggatgggttccgcaagaagaacgtcctcacacagcgcaacactccgacacacagtccg
gtaacagtgaaaatcgccagaccagacagtgcatcccggtcaacattttttgaccagcta
aattcccctggtgcactaacgtcccctgggttcggagttcaagctgacccctgctccaga
gagactgtgctgaatgtgctcagagagagccgtaaacgtgatgttgatgatgaagacaaa
agccatgcaactgggcagaagagcaaaaggaggcgtcatgacagcagtggaagttcacag
tcagcatttgagacgttactagcaaacggtgcaccatcacagcttgtgccaaaacctggc
agtttaaagagaggcatgaatacctctgtgttggaagagtccacaatgaagaggtcacgt
acatcctccataagctcagtgagtggtgcacctacttcttttggcgtgccaggatctgtc
cgcaaccccattcgcagttcctacagctcttctcaaggctacccacagcggagagcagcg
tctagcttgagtttgtctcctctcacaagccctgcatcatcacggtgtcagactcctgag
agagcagctaagaaacccagggaagaggatatcacttccccaagttctgcttcatcaatg
aagtctgataaaacagccactgacgttgttcctggctcaggaaaacgcagccctgctcct
gaggccactgtttcaacaatatcagattctggaggaagcagtggcaaacgcaagcgcaaa
atccagctggtatctacacgaaggggagaccagatctctatgccccctccccctgagttg
ggctacacagtcactgtgaaagacctggacatggagaagaaagctgctctcagccagatc
cagaaagttcttgaggaacctgagccagagaaacctgcacctgcctcggctccagcccct
gttcctactccctctatcagcctgttctcccaggtagctccagcctcttcaactgcagcc
aatcctggtgtgagcgctccctctgtggcacctctctctgctcctgcaacctccaccacc
atctctgccccagctccaactcccaccattgacctcactgtggctccagccagcacagcc
agtcctgcagcgactcttatttctgccgccgctgctgctgccaccaccaccaccagcagc
accctagcagccccagccatgagccaggctaaccccctactggagtccctaaagaacatg
agaaacaactcccagctcccctctcccctggcggctacacctgcagctccagcaacacct
gtgatggcaaagactcctgcctcgcttgcccagactggtccaggatctggagtcttgaag
tcagagcctgctcttgcccctccacagccctctgtctcaacttctcttgcgccagctacc
cactcagcaagctccacaccctctgcctttgcccagatcctggcccagccactgcacccc
tcatctatcacctttactcctccatctgggagcaccctcttcagccttaagcctcagaca
gcccctgcatctgctgcacctacacccacagcatcaattacacctacagtggctgtaagc
agtgcagctaaccctgcaccatctgggtttaagcctatttttggagccgcaaccactgcg
ccagccacagcggcagaagtcaaacccacgcaacctgtttttaaacctatttttggcagt
gcaactgaaggtggtctaagtgcgtttggtcagccaactactacaacactctcctctgca
cctgcatctcagagctccacattacttttcgggagcttgatcaacacccagccggcagct
gcctcagttgcctcgtccacacccaccacccagacttccagcaattctctgtttggaagc
tggccctctgcttctgctgctcctgctccagctcctgctgtaaacagcacctttcagttt
ggagcacaggcagcagcaacaccttcctcaggacttggtgccgccaccaccagtagcagc
ggcagcgctaacatgtttcagtttggtgctgtaaaacccacacagactgctcccgcagca
gctactcagagcacattcatgtttggtcagactcctgctgcccaaaactccaccacaacc
acatttggagggtttggcctgactaacaacacagccacaacaacagccagtgcccctacg
acccaggccacttttggtagctccacgttcagcacatccacatccttccccaacgcaacc
actcaggcacctgctgcagcaaagcctttcacgttcggtgctgggagtggagcaagtgcg
gcagcagccccattcccatttggagcacctgctagcacagcagccccttcctttgggact
cagagtcaaactacatttggcagcaccacggcagcacctacttttgggactcagagtcag
cctacgtttggcggcaccacagcagctcctagtttcgggactcagagtcagcctacgttt
ggcggcaccacagcagctcctagtttcgggactacaactcaacctacgtttggcaacgcc
tcatctggcttctcttttgcaaacaccaccaccccatcagtggctccagcctttggggcc
accacacagactgctgcccctgttccagctcctacctttacattcggagcagcctcagcc
accccacagaacaatgcccaaagtgctcctgccccagcagcttctggagggttcaatttt
accgcatcgctgtccggagcacagtttgcaacacctgcgcccgcagctcagactcaaggt
ttcccattcgggaataacaatgcggataacaagctcacttttggaacatccacccctgca
tttggcaattcaagcacgcctatcccattcggcagtccgggcactcctgtaccgggattt
actgcctcgccttttaacactccctctgccaccttctcgattggtgcgggctccaagccc
agtgggtcacggcagaggctgcaggcacgtaggcagcacgtgaggaagaagtaa
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integrated database retrieval system
