Astyanax mexicanus (Mexican tetra): 103024701
Help
Entry
103024701 CDS
T05042
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103024701
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103024701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerI
Cyclin_C
Motif
Other DBs
NCBI-GeneID:
103024701
NCBI-ProteinID:
XP_007257471
Ensembl:
ENSAMXG00000014833
LinkDB
All DBs
Position
9:complement(26508269..26534395)
Genome browser
AA seq
1799 aa
AA seq
DB search
MKRGKSRPSKDDGKGQDEPAILETEDLDKGFGRTPDPDTISLASVTAVTTNVSNKRSKPD
IKIEPGAGRPMDFQISVTVIECRQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYF
VFDFHLPPDVIFDKILKLSVIHSKNLLRSGTVVGTFKMDVGTVYSQADHQFYHKWAILCD
PDDITAGCKGYVKCDIAVVAKGDNIKTPHKANETDEDDIEGNLLLPEGVPAERQWARFYL
KIYRAEGLPKMNTSIMANVKKAFIGENKDLIDPYVQVQFAGQKGKTSVQKSCYEPIWNEQ
IVFTEQFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKISNDGDKGFLPTLGPAWVNMYG
STRSYTLMDEYQDLNEGLGEGVSFRARLLVSLAVEILDTSSPEVMCSTEVQVEGVPNISD
NAAGKIEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGSEVDDTPTKPKSKKSKKGDG
DDEESELIQGSSDEEVTDDGELVSVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQD
QRRRLYNANIIDNIADKLEEGLNDVQEIFKTEKAFPERRLRGVLEDLSHGCSNFLELANK
DQNQSGKTKLDRERLKSCMRELENMSQQAKTMRTQVKKKTVKDKFKQAQIFLQKLRFLAD
EPQHSVPDIYIWMISNGKRIAYARVPSKDILYSNVEEETGKDCGKVKTIFFKLPGKKGFG
PAGWTVQAKTEMYLWLGLNRQRKDFLSGLPNGFEENKAVKGPGMQSAPPISLIYTMKQIF
QLRVHLYQARSLFAADSTGLSDPFARVFFSTHSQVTEILNETLCPTWDQLLVFDNVELYG
EACELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPITKMSDEHYGPPRFPPQLEYYQVYR
GNCTAGEMLAAFELLQIGPGGKADLPPIDGPTDMDRGPILPVPIGIRPVLSKYRIEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGIQSALIQNYKKNPNFSTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVTSLRKFIYRPSDKSVNNWSTMEEIVIHTEPEPAVKKI
ETVVKLDSASDAVVKVDMPDDEKDGKGKKKRKKGGEEAEEEELDESMLDWWSKYFASIET
LMEIMRAQEVEKADREEDREEMDPDGTDIKPDDSNTKGNRKKKGKAKDKNKAVPGEGPHE
KKRPKIDELKVFNRELENEFEHFEDWLHTFNLYRGKSGDDDEQNASDEDRLIGKFKGSLC
MYKVPMTDDMGREMGIDSNMGMFQNIPHNDPINILVRVYVIRATDLHPADINGKADPYIA
IKLGKTEIKDKENYISKQLNPVFGKSFDIEATFPMDSSLTVSVYDWDLVGTDDLIGETKI
DLENRYYTKHRATCGITASYAIHGYNVWRDPMKPTHILAKLCKDGKLDPPQYGPGGRVKV
ANRVYTGPTEIEDENGLKKQTDEHLALAVLNHWEDMPRVGCKLVPEHVETRPLLNPDKPG
IEQGRIEMWVDMFPKDMPAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSS
DIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFIYPFDYLMAEEKIVISKKESMFSWD
ETEYKIPARLNIQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIDMVLNEQEMPMV
NIFKQKRIKGWWPFVARDENDELEITGKVEAELHLMTGEEAEKSPVGEGRNEPEPLEKPN
RPDTTLLWFLMPLKAIKHLVCNSYKWLIIKIVVVLLLLAMLGLFLYSMPGYMVKKLLGA
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtggaaagtctcgcccatccaaggatgatgggaaaggccaagatgaaccagcc
atcctggagacagaggacctggacaaaggttttggcagaactcccgaccccgacacaatc
tctttagcctctgttactgctgtaactaccaatgtctctaacaagagatcaaagcctgac
atcaagattgaaccaggtgctggaagaccgatggattttcaaataagtgtgacggttata
gagtgcagacagcttgttgggctgaatatggatccagtggtctgtgtggaaatcggtgat
gagaagaagtacacttcaatgaaggaatcgaccaactgcccgtattataatgagtacttt
gtcttcgactttcacctcccacctgatgtcatatttgacaaaatcctgaagttgtcagtc
atccactccaaaaacctgctgcgcagtgggacagtcgttggaacattcaagatggatgtg
ggaactgtttattcacaggctgatcaccagttctaccacaaatgggccattttgtgtgat
cctgatgacatcactgcggggtgtaaaggttacgtcaaatgtgacattgctgtagtggca
aagggtgataatattaaaaccccacacaaagccaacgaaactgacgaggatgacattgag
gggaatctgcttttgccagagggtgtcccagcagagcgccagtgggcacggttctatctg
aaaatctacagagctgaaggattacccaagatgaacaccagcattatggccaatgtgaaa
aaggcttttattggtgaaaataaagatctcattgatccatatgttcaagtgcaatttgct
ggtcagaagggcaaaacatcagtccagaagagctgctatgagccaatctggaatgagcag
atcgttttcactgaacaatttccaccactgtgcaagcgcatgaaggttcaaatccgtgac
tcggacaaagtaaacgacgtggccctcggaactcatttcattgacttgcggaagatctcc
aatgatggagataaaggctttttaccaactctggggccggcctgggtgaacatgtatggt
tcaacacggagctacaccctgatggatgagtaccaggacttgaatgagggacttggagag
ggagtctcattccgggctcgactgctggtcagcctagctgtggaaattctggacacctcc
tctccagaagtaatgtgctcgactgaggtgcaggtggagggggtgcccaatatttctgac
aatgctgctggaaaaattgaggagtttttcttgttcggagcattcctggaagctaccatg
attgacagaaaaattggtgataagcccatcaactttgaagttacaataggaaactatgga
agtgaggtggatgataccccaaccaaaccaaaatcaaagaagtcaaagaaaggcgatggt
gatgatgaagagtcagaactcatccaaggctccagtgatgaagaagtaactgacgatgga
gaactggtgtcagtctccaccactccaccaatgaaaccagtcatcactgacaggaactac
ttccacctcccatattttgagaggaagccctgtatctatattaagagctggtggcaagat
cagagaagaagactgtacaatgccaacataatagacaacatcgcagataagttggaagaa
gggctgaacgatgtgcaggagatctttaaaacagagaaagcctttcctgagcgtagactg
agaggggttctagaggacctgagccatggttgcagcaactttttagaactggcaaacaag
gaccaaaaccaatcagggaaaacaaaactggaccgggaaagactgaaatcatgcatgagg
gagctggaaaacatgagccaacaagcaaagacaatgcgaactcaggtgaagaaaaaaact
gtgaaggataaattcaaacaggcacaaatcttcctccagaaactgagattcttggctgat
gagcctcaacacagcgttccagacatttacatatggatgataagcaatggcaagcgcatt
gcatatgctagagtgccatccaaagacatcctgtattctaatgtggaagaagagaccggg
aaagactgtggaaaagtcaagaccattttcttcaaactcccaggtaagaaggggtttggg
ccagcaggatggaccgtgcaggcgaagacagagatgtatctttggctgggcctgaacagg
cagcgcaaggacttcttgagtggtctaccaaatggatttgaggagaacaaagcagtgaag
ggacctggcatgcagtcagcgccaccaatcagcctgatctacaccatgaagcagatcttc
cagctgagggtgcatctgtatcaggcaagaagcctgtttgcagcagatagcacaggcctc
tcagatccgttcgccagagtcttcttttctactcacagtcaagtcacagagatactgaat
gagaccctctgccctacatgggaccaacttctggtctttgacaatgttgaactgtatggt
gaagcctgtgaactaagagatgaccccccaattattgtcattgagatctatgaccaggac
actgtgggcaaagctgacttcatgggcagaacattcgccaagccaataactaaaatgtca
gatgagcattatgggccaccacgattccctcctcagttagagtactaccaggtctacaga
gggaactgcactgctggtgaaatgcttgctgcctttgaactgctacagattggaccaggt
ggaaaggctgacttgccgcccatcgatggacccactgatatggaccgtggaccaatcctt
ccagtccctattggcattagacccgtcctgagcaaataccgcatcgaggttttattctgg
ggtctaagagacctgaagagagtaaacctggcccaagttgacagaccacgtgtggacata
gaatgtgctggaaaggggatacaatcagctctcattcagaactacaagaaaaatccaaac
tttagcactctcgtcaagtggttcgaagtggatttgccagaaaatgagcttctccatcct
cctcttaacattcgggtggtggactgcagagcctttggccgctacaccttggttggctcc
catgctgtcacctcattgcgcaagtttatttacaggccaagtgacaagagtgttaacaac
tggtcaactatggaggaaattgtgatccacacagaaccagaacctgctgtgaagaagatt
gagacagttgtcaaacttgattcagcatctgatgctgttgtaaaggtggatatgcctgat
gatgagaaagatggaaaggggaagaagaaaagaaagaaaggaggagaggaagcagaagaa
gaagagctagatgagagcatgctggattggtggtccaagtactttgcgtccattgaaact
ctaatggagataatgagagcccaagaggttgagaaagcagacagagaggaggacagagaa
gaaatggacccagatggaacagatatcaaacctgatgattctaatacaaaagggaacagg
aagaaaaagggaaaagccaaggacaagaacaaggctgtgccaggggagggtccgcacgag
aagaagagacccaaaattgatgaactgaaggtgtttaacagagagctagagaacgaattt
gaacactttgaagactggctccacacgttcaacctttatcgagggaagagtggtgatgat
gatgaacaaaatgcatcagatgaagacaggcttattggaaaattcaaaggttccttgtgt
atgtacaaagtgcctatgacagacgacatgggtagagaaatgggcatcgattccaacatg
ggcatgttccagaacattccacacaatgatccaatcaacatcctagttcgagtctatgtc
ataagggctacagatctgcaccctgcagatataaacggaaaagcagatccatacattgcc
attaagctgggaaagacagagatcaaggacaaagaaaactacatctccaagcagctcaac
ccagtctttggaaaatcatttgacattgaggcaacattcccaatggactcctccctcact
gtgtctgtctacgactgggacttggtaggcactgatgacctgatcggggagaccaaaatt
gatctggagaaccgctattataccaagcacagggctacgtgtggtattacagcaagctat
gcaatccatggctacaacgtatggagggacccaatgaagccaacacatatccttgcgaag
ctttgcaaggatggcaaactagatccacctcagtatggccctggaggaagagtcaaggtg
gcaaacagagtttatacaggaccaactgaaattgaggatgaaaatgggctgaaaaaacaa
acagatgagcaccttgctctagctgttcttaaccactgggaggacatgccacgagtgggc
tgcaaacttgtcccagagcacgtcgagacaagacctctactcaatcctgataaacctggg
attgaacaggggagaatcgagatgtgggtggacatgtttccaaaggacatgccagcacca
gggcctgcccttgatatttccccaagaaaaccaaagaagtttgagctcagggtgattatt
tggaacacagatgaagttgtgctggaagatgatgatatattcacaggagaaaagtccagt
gatatttttgtgagaggatggctaaaaggacaacaagaagacaagcaagacacagacgtc
cattaccactccctaacaggggagggaaattttaactggcgcttcatttacccatttgac
tatctaatggcagaggagaaaattgttatctcaaagaaggaatccatgttctcctgggac
gagactgagtacaagatccctgcccgtctgaacatacaagtctgggatgcagatcatttc
tctgcagatgacttcctgggtgcaattgaactagacctgaacagatttcctcgcggggca
aaaacggcgaaacagtgcaccatcgacatggttcttaacgaacaagaaatgccgatggtt
aacatcttcaagcagaaaagaatcaagggttggtggccttttgtagccagggatgaaaat
gatgaattggaaatcacgggaaaagtagaagcagagctgcacctcatgacaggtgaagag
gctgaaaaaagtcctgttggtgaaggacgcaatgagccagagcctctggagaaaccaaac
cgtcctgacacaactctgctgtggttcctcatgcctctcaaagctatcaaacatctcgtc
tgcaacagctacaagtggctgatcatcaaaattgtggtggtgctgctgttgctggcaatg
ctgggattattcctttacagcatgccaggatacatggtgaaaaagttgcttggtgcctaa
DBGET
integrated database retrieval system
