Astyanax mexicanus (Mexican tetra): 103027557
Help
Entry
103027557 CDS
T05042
Symbol
rho
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103027557 (rho)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
amex04030
]
103027557 (rho)
G protein-coupled receptors [BR:
amex04030
]
Rhodopsin family
Vision
Opsin
103027557 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
Rnf-Nqr
Motif
Other DBs
NCBI-GeneID:
103027557
NCBI-ProteinID:
XP_007238342
Ensembl:
ENSAMXG00000017182
UniProt:
A0A8B9J4M1
LinkDB
All DBs
Position
6:45607741..45613573
Genome browser
AA seq
354 aa
AA seq
DB search
MNGTEGPNFYVPMSNRSGLVRSPFEEPQYYLAEPWKYSLLAAYMLFLMVTSFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVIGGFTVTLYTALHGYFVLGVTGCNIEGFFATMG
GEIALWSLVVLAIERYVVVCKPMTTFRFGEKHAIVGVGFTWVMALTCAVPPLLGWSRYIP
EGMQCSCGIDYYTPKPEINNTSFVIYMFILHFSIPLFIIFFCYSRLLCTVRAAAAQQQES
ESTQRAEKEVTRMVVVMVIAFLVCWVPYATVAWYIFANQGTEFGPVFMTVPAFFAKSAAL
YNPVIYILLNRQFRNCMLTTVCCGKNPFGEEETSSTVSSKTQSSVVSSSQVAPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacagagggtccaaacttctacgtgccgatgtccaacaggtcgggcttggtc
cgcagcccgttcgaggagccgcagtattacctggcggagccgtggaagtactctctgctg
gccgcctacatgcttttcctcatggtcacctcatttcctatcaacttcctcaccttgtac
gtaactgtgcagcacaagaagctccgcacacccctcaactacatcctgctgaacctggct
gtggcggacttgttcatggtgatcgggggcttcacagttacgctctacaccgctctgcac
ggctatttcgtcctgggtgtgacgggctgcaatatcgagggcttttttgccaccatggga
ggagagatcgctctgtggtctctggtggtcttggctatcgagcgctatgttgtggtctgc
aagcccatgacaacgttcagatttggagagaagcacgccatcgtaggggtcggttttacc
tgggttatggccctcacctgtgctgtcccaccactccttgggtggtctaggtatattcca
gaggggatgcagtgctcttgtggaattgattattataccccaaagcctgaaatcaacaac
acctcattcgtcatctacatgttcatcctccacttcagcattcccctcttcatcatcttc
ttctgttacagtcgcctcctctgcactgtccgggcggctgcagctcagcagcaggagtct
gagagcactcagagggcggagaaggaggtgacccgtatggtggtggtgatggtgattgca
ttcttggtgtgctgggttccgtatgccactgtagcctggtacatatttgccaatcaaggt
actgagtttggtccagtgttcatgacagttcccgccttcttcgctaagagtgctgccctc
tacaacccggtcatctacatcctcctcaacagacagttcaggaactgcatgctgaccact
gtgtgctgtggcaagaatccgttcggtgaggaggagaccagctccaccgtctcctccaag
actcagtcttcagtggtctcctccagccaggtggctcctgcctga
DBGET
integrated database retrieval system