Astyanax mexicanus (Mexican tetra): 103027670
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Entry
103027670 CDS
T05042
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103027670
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103027670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
U-box
Zn_ribbon_SprT
DUF3632
Motif
Other DBs
NCBI-GeneID:
103027670
NCBI-ProteinID:
XP_007260549
LinkDB
All DBs
Position
3:complement(25047413..25063291)
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AA seq
563 aa
AA seq
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MAEASISVDEDQFICPVCLDLLKHPVTINCGHSYCMVCIYKHWDQEEQRGVYSCPQCRET
FTPRPVLRRNNMLAEVVEKLKKTEVRAASPAHCYAGAGDVECDFCTGRKLKAIKSCLVCL
ASYCETHLQPHYQSPAFKKHKLVKASKQLQEKICSQHDKLIEIYCRTDQTCICYVCMMQE
HKEHDTVVSAAERTEKQRELKQQQRKSQQRLQEKENQKQELKKTINFIKFSAQSAVEDSE
RIFTELICSIEKKRSEVTELIRDQEKTELSAAEELLEQLEQEITDLKRRNTELEQLSHTE
DHIHFLQSFQSVSVSSGGEDSPSGTVHHHLSFDGVRKSLSDLKERLVIFCNEEFNKMNLP
NQAKRTGQRKEVPVSLPPEPKTRQDFLQYFFPLTLDPSTLYHKLSVSEENKMVTWRGGAQ
RYPDHPERFDHWPQVLCKEGMSGRCYWEVEWNNGGWGVSISVSYKDISRKGKRDEFAFGG
NSKSWSLLCSSILSFWHNNVETKIPGRSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHT
TFTQPLYAGFWLRKGMLKLCDPN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatgaggatcagttcatctgtccagtctgtctggat
ctgctgaagcacccggtgaccataaactgtggacacagttactgtatggtgtgtatttac
aaacactgggatcaggaggagcagaggggggtctacagctgcccccagtgcagagagacg
ttcactccgaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagacagaagtccgagctgcttctcctgctcactgttacgctggagctggagatgtg
gagtgtgatttctgtactgggagaaaactcaaagccatcaagtcctgtttggtgtgtctg
gcttcttactgtgagactcatctccaacctcactatcagtctcctgcctttaagaagcac
aagctggtcaaagcctccaaacagctgcaggagaagatctgctctcagcatgataaactg
atcgagatctactgtcgtactgatcagacctgcatctgttatgtatgtatgatgcaggaa
cacaaagaacatgatacagttgtatctgcagcagaaagaactgagaaacagagggagcta
aagcagcagcaaagaaaatcccagcagagactccaggaaaaagagaaccagaagcaggag
ctgaaaaagacgataaactttattaagttctctgcacagtcagcagtggaggacagtgag
aggatctttactgagctgatctgctccattgagaaaaagcgctctgaggtaactgagctg
atcagagatcaggagaagactgaactgagtgcagctgaagaactcctggagcagctggag
caggagatcactgatctaaagaggagaaacactgagctggagcagctttcacacacagag
gatcacatccacttcctccagagtttccagtctgtgagtgtctcttctggaggtgaggat
tcacccagtggcactgtccatcatcatctttcatttgatggagtgaggaaatctctctct
gatctgaaagagagactggtgatattctgcaacgaggaattcaataaaatgaatcttcct
aaccaggcaaagcgtacaggtcaacgtaaagaagttccagtgtctttacccccagagcca
aaaaccagacaagatttcctacagtatttctttccgctgactttggatcccagcacacta
tatcataagctcagtgtgtctgaggagaacaaaatggtgacatggagaggaggagcacag
cgttaccctgatcacccggagagatttgaccactggcctcaggtgttgtgtaaggagggg
atgagcggacgctgctattgggaggttgaatggaacaacggcggatggggagtgtccatt
tcagtctcgtataaagacattagcaggaaaggaaaaagagatgagtttgcatttggagga
aacagtaagtcctggagtctgctgtgttcttccattctctcgttttggcacaataacgtt
gaaactaagatcccaggccggtcatcctccagaataggagtgtatgtggatcacagtgca
ggaactctgtccttctacagcgtctctgatacaatgaccctcctacacacagtccacacc
acattcactcagcccctctacgctggattctggttgaggaagggaatgttgaagttatgt
gatccaaattag
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