Astyanax mexicanus (Mexican tetra): 103032606
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Entry
103032606 CDS
T05042
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103032606 (wdr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103032606 (wdr3)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103032606 (wdr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
NBCH_WD40
ANAPC4_WD40
WD40_like
WDR54
RMC1_N
Utp21
Nup160
Motif
Other DBs
NCBI-GeneID:
103032606
NCBI-ProteinID:
XP_022536176
Ensembl:
ENSAMXG00000005755
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All DBs
Position
19:complement(22207557..22232004)
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AA seq
940 aa
AA seq
DB search
MGLTKQYLRYNASAVFGVIGSQKANIAYVTLRGGEKGRYVAVGACEHVFIWDVRKAEKVL
ILQGSKHDATYLCPSPDGVHIAVGYEDGCVRIFSLLNGENNVSFNGHKSAVTSIQYDALG
ARLVTGSRDTDVIVWDVINECGLYRLKGHKDAITQALFLKDRNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRGWDIEYLEEGKEVGEPMEKKGKS
LLDDDEADSGDEGPNEDPEERILSCKKAGSVIREGRDRVVSLTADPKAKVVACHGVDGYL
ELFSVVPEEDVQKKIEKKLKKARKKAKSQEGGGEAADPVVERKLTDELEKLTNIKASSKI
RSVDCILFPNGELKVALLLQNNTIETYNLNTTEKNATGTKTSRLTLAGHRTDARTLAFSS
DNIAVLSASGDTVKVWNRATLQVIRTMACEYALCSLFVPGDRQIILGTKSGKIQIFDLAS
GSLLETREAHDGALWSVCLSPDQRGIVTGGADKTVKFWDFELIKDKDSGPNKRLTLKHTR
MLQLDEDVLCVRYSPDQRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDSA
LIATGSADRNVKVWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDRKIKQWDADK
FEHIQTLEGHKGEVWCLAISPSGDYVVSSSHDKSLRLWERTREPIILEEEKEMEREAEFE
ESLGKGEEPVVPGETKGEAEPAGKKTIETVKAAERIMEALELYREESKKLEEHKAACEAA
GKQLPPPKTNPILVAFGNISPSRYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLFNSYV
QQGLEVELVCRCLFFLLRIHFGQITSNHMLLSVIDDLRTNTISKVREIRDVLGFNSAGLQ
FLQREIESKEDVMFFADATDRFEEKKRKRRKRERAILTIT
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgactaagcagtacctgcgctacaacgcctctgcggtttttggagtgattggc
agtcagaaggccaacattgcgtatgtgaccctgagaggtggagagaagggtcgatatgtg
gcagtgggagcctgtgagcatgtgttcatatgggatgtgcgcaaagctgagaaggttcta
atccttcagggtagtaaacacgacgcaacttatctctgcccctcccccgatggtgttcac
atagctgtgggttatgaagatggttgtgtgcgcatattcagtctgttaaatggggaaaac
aatgtctccttcaatggacacaaatctgctgttacgagcatccagtatgacgcactgggg
gcacgactggtcactggctccagggacacagatgtaattgtgtgggatgtgataaacgag
tgtggattgtacagactgaaaggacacaaagatgccatcacacaagctctgttcctaaag
gacagaaatctgctggtcacaagctcaaaagacagttttgtaaaatggtgggacttggat
actcagcactgttttaagaccatggtgggccaccgcagtgaggtttggggaatggttctg
ttgaatcaggagaacaggctgctgaccggctctgctgacagtgagctccgaggctgggac
attgaatacctggaggagggtaaagaagttggagagccgatggagaaaaaagggaaaagt
cttcttgatgatgatgaagctgacagtggagatgaaggtcctaatgaagatccagaagag
agaatcctcagctgtaagaaagctggttctgtcataagagaaggcagagacagggttgtg
tccttgactgctgatcccaaagctaaagttgtggcatgccatggagttgatggctatctg
gagctcttcagtgttgttccggaggaggatgtacagaagaaaatagagaaaaagctgaaa
aaagcaagaaagaaggcaaagtctcaggaagggggcggtgaagcagcagatccagtagtg
gagaggaaactgacagatgagcttgaaaagctgaccaatataaaagcctcttccaaaatc
agatccgtggactgcattctgttccctaatggcgagctgaaagttgctctgctgctgcag
aataacacaatagagacctacaacctgaataccacagagaagaacgcgactggaaccaaa
accagccgcctcacgcttgcaggccaccgtaccgatgctagaactctggccttcagctca
gataacattgctgtgctctctgcctctggagacacggtcaaagtgtggaacagagccact
ctgcaggtgattcgaaccatggcctgcgagtatgctctctgctcactgtttgtgcctgga
gacagacagattatcttaggaacaaagagtgggaagattcagatttttgatcttgcgtca
ggaagtctgctggagactagagaagctcatgatggagcgctgtggtctgtgtgcctctct
cctgatcagaggggtatagtaactggaggagcagacaagactgtgaaattctgggatttt
gagctgataaaggacaaagattccggaccaaacaagagactcacactgaagcacactcgc
atgctgcagttggatgaggatgtgctgtgtgtgcgctacagtcctgatcagaggctgctg
gctgtctctctgctcgactgcactgtgaagatcttctacacggacacactgaagttcttc
ttgtcgctgtatggacacaaactgcccgtgctgtgtctggatatttcccatgatagtgca
ctgatagccactggatcagcagacagaaacgtgaaagtgtggggtctggacttcggtgac
tgccatcgttcaatgtttgcacatgatgacagtgtcatgttcctccagtttgttcccaaa
acccatctgttcttcacagcggggaaggacagaaagatcaaacagtgggacgccgacaag
tttgagcacatccagactctagagggtcataagggtgaagtttggtgtctggccatcagt
cccagtggagactatgttgtgtcatcctctcacgataaatccctcaggctttgggagaga
accagagagcctattattctggaggaggagaaagagatggaaagagaagcagaatttgaa
gaatctttgggaaaaggagaagagcctgtggtccctggagagactaaaggagaggcagag
ccggcggggaagaagactatagagacagtcaaagctgctgaacgtataatggaagccctg
gagctctacagagaggagagcaagaagctggaggagcacaaggctgcctgtgaggcagca
gggaagcagttaccgcctcccaagaccaaccctatccttgtagcctttggtaatatttcg
ccctctcgttatgtgctagatgtcatcaagaaggttcgatccagtgagctagaggtttct
ctgctggtgctgccgttcccgtatatccccgacctgctctctctcttcaacagctacgtc
cagcagggtctggaggtggagctggtctgtcgctgcctcttcttcctactcaggatccac
tttggtcagatcaccagtaaccatatgctgctgtccgttatcgatgacttaaggaccaac
actatctccaaagtgcgggagatcagggatgttctgggcttcaacagcgctgggctccag
ttcctgcagcgagaaatcgagagtaaagaggacgtgatgttcttcgctgatgctacagat
cgttttgaggagaagaagagaaagaggagaaagagggagagagccattctgaccattaca
taa
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