Astyanax mexicanus (Mexican tetra): 103033598
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Entry
103033598 CDS
T05042
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103033598
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103033598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Y1_Tnp
U-box
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
Ran-binding
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
103033598
NCBI-ProteinID:
XP_022520203
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAEAGILVVQDEFSCSVCLDLLKDPVAIPCGHSFCMVCINGFWDQEDQKKIYSCPHCRHT
FTSRPVVSKNTMLAEVVEKLKKTRLQAAPPDHSSADPEDVECDFCTGRKHKAVQSCLVCL
ASFCEAHLQPHYQSPAFKKHKLVKASRRLQEQICSQHDKLLEVYCRTDQQCICMLCTMDD
HRGHDTVSLKAERSEKQKQVVETQRKYKERIQEREKELQELIEAVENHKRSAQTAVEDSE
KIFTEMILSIERRRSEVRQMIRDQEKVAVSEAEERLKRLEQEITELKRRDADLEKLSFTE
DHIHFLQSFQTLSAPPGSSASPAFTLSPLNTFEVVMKSVSQLRGKLDKFWKEEFEKTSAA
VKEVQIIPEPQSREEFLEYSCQLTLDPNTAHKLLLLSERNTVVTCSNTVQPYPDHPDRFD
EWWQVLCRESVSGRCYWEVEWRGDGGVYIAVSYKSISRKGGGWECGFGCKNDQSWRLSCN
SSRYTFRYNNRDTEISGVPVSSRVGVYVDHRAGTLSFYSISDTMTLIHRVQTTFTQPLYA
GFGLSLDSSVNLLLSAK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctggtattttggtagttcaggatgagttcagctgttcagtctgcctggat
ctcctgaaggatccagtggctattccctgtggacacagtttctgtatggtgtgtattaat
gggttctgggatcaggaggatcaaaagaagatctacagctgccctcactgcagacacacc
ttcacctcaagacctgtcgtgagtaaaaacaccatgctggctgaggtggtggagaaactg
aagaagacgagactccaggctgctcctcctgatcactcttctgctgatcctgaagatgtg
gagtgtgatttctgtactgggagaaaacacaaagccgtccagtcctgcctggtgtgtctg
gcctctttctgtgaagctcacctccagcctcactaccaatctccagcctttaagaagcac
aagctggtcaaagcctccagacgactccaggagcagatctgctctcagcacgataaactg
ctggaggtttactgtcgcaccgaccagcagtgtatctgcatgctgtgtaccatggatgac
catagaggacatgatacagtgtcacttaaagcagaaagatctgagaaacagaagcaggtg
gtggaaacacagaggaaatacaaggagagaatccaggagagagagaaggagcttcaggag
ttaatagaagctgtggagaatcacaagcgctctgctcagacagcagtggaggacagtgag
aagatcttcactgagatgatcctctccattgagagaagacgctctgaggtgaggcagatg
atcagagatcaggagaaagttgcagtgagtgaagctgaagaacgtctgaagagactggag
caggagatcacagagctgaagaggagagatgctgatctggagaagctttcattcactgag
gatcacatccatttcctccagagttttcagactctctcagctcctcctggatcttcagca
tcacctgcttttactctcagtcctctcaacacttttgaagttgttatgaagtctgtttct
cagctgagaggaaaactagacaaattctggaaagaggaatttgagaagacatcagctgca
gtgaaggaagtgcagatcattcctgaaccccaaagcagagaagagtttctggagtattcc
tgtcagctcacactggatccaaacacagcccataaactcctcctcctgtctgagaggaac
acagtggtgacctgcagcaacacagtccagccatatcctgaccatccagacagatttgat
gaatggtggcaggttctgtgtagagagagtgtgagtggacgctgctactgggaggttgag
tggagaggagatggaggggtttatatagcagtgtcttataaaagcatctccaggaaggga
ggaggctgggagtgtgggtttggatgtaagaatgatcagtcttggagattgtcctgtaat
tcctccagatacacattcagatacaataacagagatactgaaatctctggagtgcccgtc
tcctctagagtaggagtgtatgtggatcacagggcaggaactctgtccttctacagcatc
tctgataccatgaccctcatccacagagtccagaccaccttcactcagccgctctacgct
gggtttgggttgagtctcgactcatcagtaaatcttttactttcagcaaaatag
DBGET
integrated database retrieval system
