Astyanax mexicanus (Mexican tetra): 103035888
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Entry
103035888 CDS
T05042
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X2
KO
K14946
RNA binding protein fox-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103035888
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103035888
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
103035888
NCBI-ProteinID:
XP_015457411
Ensembl:
ENSAMXG00000015312
LinkDB
All DBs
Position
4:7583827..8281690
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AA seq
388 aa
AA seq
DB search
MRKTSRYHMLCSMANTGCVLLSSGSGLLPHSLQCPPAFLYLPEGNQEAPAPPEAMAQPYA
PAQYPPPPPQNGLPGEYAHPGQEYTGPSPVPEHAAALTIYTPTQTHSEPPGTDSSTPSLT
GTSSIPACDFLQQADEVAQTDASQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMF
GQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMT
NKKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYNTFR
AAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATADPYH
HTIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaacgtcccgttaccacatgctgtgctccatggcgaacacgggctgtgtgctg
ctctcgtccggctccgggctgctccctcactcgctccagtgtccccccgcgttcctctat
ctgcccgagggtaaccaggaggccccagctcctccagaggccatggctcagccgtacgct
cctgcacagtacccccctcctccaccccagaacgggctgccgggcgagtacgcccaccca
gggcaggagtacacagggcccagcccagtgccggagcacgcagccgccctcacgatctac
acacccacacagacacacagcgagccgcccggcactgacagcagcacgccctccctcaca
gggaccagcagcataccagcctgtgattttctccagcaggcggacgaggtggcgcagacg
gacgcctcccagcagctccagctccagccctcagactcatcggagaagcagcagcccaag
cggttacacgtctccaatattcccttccgctttcgtgacccggacctgcggcaaatgttt
gggcaatttgggaaaattttagatgtggaaattatttttaacgagcggggctctaagggt
tttggttttgtaacttttgaaacgagtgcagacgccgaccgtgcacgggagaaactaaat
ggtacaatcgtagaaggacgcaaaatcgaggtaaataatgcaacagcaagagtaatgaca
aacaaaaaggtggcgaacccttatacaaacggctggaagctgaacccagtggtgggagct
gtctatggtcctgaattttatgcagtgacgggtttcccatacccaaccacaggggcaaca
gtggcgtacaggggcgcccacttgaggggccggggtcgcgcagtctacaacacgttccgt
gccgcacctccaccccctccaatccctgcttatggagctgtggtttaccaggatggcttc
tatggtgccgagatctatggtggctatgcagcgtacaggtatgcccagccagccgcagca
gctgcagcagcttacagtgacagttatggcagagtctatgcaacagcggacccctaccac
cacacgattggacctgcagccacgtacagcgtgggcactatggctagcctatacagagga
gggtacagtcgcttcactccctactaa
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