Astyanax mexicanus (Mexican tetra): 103037636
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Entry
103037636 CDS
T05042
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103037636 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103037636 (usp47)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103037636 (usp47)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103037636 (usp47)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103037636 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Motif
Other DBs
NCBI-GeneID:
103037636
NCBI-ProteinID:
XP_007254706
Ensembl:
ENSAMXG00000010037
UniProt:
A0A8B9JKT4
LinkDB
All DBs
Position
5:33507424..33547355
Genome browser
AA seq
1385 aa
AA seq
DB search
MEMVPSEEKQLVPKEGVFWSCRQSIFEEMKKKFSQIESAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTSVAKLYEDVAQKAGYVNGTFELGWGNVVDMAPLDQASEMSLVESGFEAGK
RNFLQLTDKDGEQPQIASDESGTADSSGLDDSTQDRFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDLEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDGVDEGICLDSTSATERVL
KPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDVEDFPEHIKRLVQTEKESEEQEKRQ
REIERNTCKIKLFCMHPFKMMMIENKLEVHKDKTLREATEIAYKLMDLEGTVPLSCCRLV
KYDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVH
AVDLKSETISPPVSVRAYLNQTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNK
TLKAEGFFRSNKVFVESSDSPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPEQSPGSLAHR
TSCPKVIGDSEDSFEGAKGSGQSVEAILEESTEKLKNLSLQQQQQQQQQQQQQQTTSSTS
DSQKSSDHSDFEHIESPAVESDSAVQPATQTTSGSSMGGTASDPENQFPSEERSDSDVNN
DRSTSSVDSDILSSSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAE
EDSGTDSEYDENGKSKGEAQYLYFRAEPYSQEDSAGENQKYLLVHVDKRITLAAFKQNLE
PFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQL
LVNDPEPCKFLLDTVFAKGMTVRQSKEELLPQLKDQCKLDLSIDRFRLRKKTWKNPGTVF
LDYHVYEEDINISSNWEVFLEVLEEPERMKSMSQLAVLTRRWCPAQMKLEPFREVVLESS
SVDELKEKLSEMSGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICD
DGAVVFYRDSTEEPMELSEEERSELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPTK
DSGQD
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggagaagcagcttgtacctaaagagggtgtattttggagt
tgcaggcaaagtatttttgaggagatgaagaagaagttctctcagatagagagcgctgct
gaggagcccagggtgctgtgcatagtccaggacaccactaatgccaagacagtcaatgag
agactgaccctcaacctcccggcttccacgtccgtcgccaagctgtatgaagacgtcgct
caaaaggctggctatgtgaatggcacctttgaactgggatggggcaatgtggtggatatg
gctcctctggaccaggccagtgagatgtctctggtggagtctgggttcgaggcagggaag
aggaacttcctgcagctcacagacaaggatggggagcagcctcagatagcttctgatgag
tcaggcacggcagacagcagtgggctggatgacagcactcaggaccgcttcattgggccg
ttgccccgggatggtactgtgggctgcagcagtgattacagcagccccagctactcctac
tcctctatactcaacaagtcagagacaggatatgtgggtttggtaaatcaggctatgacc
tgttacctgaacagtttactgcagaccctgtttatgactccagagttcagaaacgcactc
tacaagtgggagtttgaggagtctgaggaagacccggtcaccagtatcccttaccagctg
cagaggctgtttgtgctgctgcagaccagcaagaagcgtgccatcgaaaccacagacgtg
acgcgcagcttcggctgggacagcagtgaagcatggcagcagcacgacgtccaggaactg
tgccgggtcatgttcgacgccttggagcagaaatggaaacagacagaacaggctgacctt
ataaaccagctgtaccagggcaagctgaaggactatgtgcgctgcctggagtgcggctat
gagagctggaggatcgacacatacttggacatccctctagtcatcagaccgtttggagct
agccaggcttttgggagtgtggaggaagcattgcaggccttcatccagccagagacgctc
gatgggccgaaccagtacttctgtgagcgctgcaagaagaaatgtgatgctcggaagggc
ctgagattcctgcacttcccttatctcctgaccctgcagctgaagcgttttgactttgac
tacaccactatgcaccgcatcaagctcaacgaccgcatgaccttcccagaggagctggac
atgagccccttcatcgacctcgaggatgagaagtctcctcagacagagagctgcactgac
agcggggcggagaacgagggcagctgccacagcgaccaaatgagcaatgacttctccacc
gacgatggtgtggacgagggcatctgcctggacagcacgagtgccactgagagggtcctg
aagccaaagagctcgctaaccttcgaactcttctcggtaatggttcactctggcagcgct
gcaggtggacactattatgcctgtatcaagtccttcagtgacggccagtggtacagcttc
aacgaccagcatgttagcaagattacacaggatgacatcagaaagacatatggcgggtcc
tcagggagcagaggctattactcgagtgcctttgccagctccacaaatgcgtacatgctt
atatacagactgaaggatccctcaaggaatgcaaagtacctcgatgtggaggatttccca
gagcacataaagcgccttgtccagacagagaaggagtctgaggagcaggagaagaggcag
agggagattgagcgcaacacgtgcaagatcaagctgttctgcatgcatccattcaagatg
atgatgattgagaacaagctggaggttcacaaggacaaaaccctcagagaggctacagaa
atagcttacaagctgatggatcttgagggcacggttcctctaagctgctgtcggctggtg
aagtacgatgagtttcatgagtacctggagcgctcgtatgagggcgaggaggacatgccc
atgggactgctccttggtggggtcaaatcctcctacatgtttgacctgttgctggagacc
cgcagaccggaccaagtgttccagccctacaaacctggagaagtgatggtgaaggtccat
gctgtggatttgaaaagtgagaccatctctcctcccgtcagcgtcagggcatatctgaac
cagaccatcacagagtttaagcaactcattgcacaggccactggactgtctgcagaaacc
atgcgtgtcgtcctggagcgctgctataatgaccttcggcttctctatgtccccaacaag
acactgaaagcagagggtttctttaggagtaacaaggtttttgtggagagctcagactca
ccagaccaccaggtcacattcacagactccctcttgtggaagctcctggaccgccacggg
aacaccatcagactgtttgtgtctcttccagagcagtctccaggctctctggcccataga
actagttgccccaaagtgatcggtgactctgaggactcgtttgaaggagcaaagggcagc
gggcagtctgttgaggccattctggaggagagcacggagaagctcaagaatctgtctctt
cagcagcagcagcagcaacagcaacaacagcagcagcagcagacaacctccagcaccagc
gacagtcagaaaagttcagaccacagtgactttgagcacatcgaatctcctgcagtcgag
tctgacagtgccgtccagcctgctacccagacgaccagtgggagcagcatgggaggaacg
gcctctgacccagaaaaccagtttccctcagaggagcgctccgactcggacgtgaacaac
gaccgcagcaccagctcggtggactcggacatcctgagctccagccacagcagcgacacg
ctgtgcaacgccgacagcggcccattgcctctggccaacggcctcgactcgcacagcatc
accagcagccgccgctccaaagcacacgagggaaagaaggagacgtgggacacggccgag
gaggattcaggcaccgacagcgagtacgatgagaacggcaagagtaaaggagaagcacag
tacctgtacttcagagccgagccctactcgcaagaggattctgctggagaaaaccagaaa
tatttactcgtccacgttgataagaggatcacactcgcagcattcaaacagaacctggag
ccgttcgttggagtcacttccacccagttcaaggtcttccgggtttacgccaacaaccag
gagttcgagagtgtccgactcaacgagaccctctcctctttttcagatgacaataagatc
accattcggttaggaagagcactgaagaaaggggagtaccgggtgaaggtctaccagctg
cttgtcaatgatcctgagccctgtaagttcctgttggacactgtgtttgctaagggcatg
actgtgagacagtctaaagaggagctgctgcctcagctcaaagaccagtgcaagctggac
ctcagcatagacaggtttcgactcaggaagaagacctggaagaacccaggcacagtgttt
ctggactatcacgtctatgaagaggacattaatatctccagtaactgggaggtgtttctg
gaagttcttgaagaaccggagcggatgaagtccatgtcccagctggccgtgctgacgcgg
cgctggtgtccagcccagatgaagctggagcctttccgggaagtggtactggagagcagc
agtgtggatgagcttaaggaaaagctcagtgaaatgagtggaattcctctagaaaacttg
gagtttgccaagggaagaggaacatttccttgtgacatatctgtgttggagattcatcag
gatttggactggaatcctaaagtttccacacttaatgtctggcccctctacatctgtgat
gatggtgcagtggtcttctacagggacagcactgaagagcccatggagctctctgaagag
gagcgcagtgaactgatgaagaaggagagcagccgtctgctgaagacggggcaccgggtc
agctactcgccccgcaaagagaaagcccttaagatctatctagacggaggacctaccaaa
gactcgggccaggactga
DBGET
integrated database retrieval system
