Astyanax mexicanus (Mexican tetra): 103042406
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Entry
103042406 CDS
T05042
Symbol
ccdc22
Name
(RefSeq) coiled-coil domain-containing protein 22
KO
K23343
coiled-coil domain-containing protein 22
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103042406 (ccdc22)
04121 Ubiquitin system [BR:
amex04121
]
103042406 (ccdc22)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Others
Others
103042406 (ccdc22)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
103042406 (ccdc22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
MetOD2
Hemerythrin
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
103042406
NCBI-ProteinID:
XP_007231966
Ensembl:
ENSAMXG00000007656
UniProt:
A0A8B9LK49
LinkDB
All DBs
Position
6:complement(6521838..6543630)
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AA seq
639 aa
AA seq
DB search
MEEVDRILIHSLKQAGTDIDEDVQSVKQFSSELIVEAVVRCLRVIDPGLGSGLSPTLPPG
MSARFRLGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEASDQPA
GKSVLLQKAIAAQIKAQLALPWLPPSCRLPLHRKTQSPGLCHSFRAQPLSLPYSQKASTK
KQAKEVKEYWREHLVPVTSQPSHRASILASLLENHVSELSAAQEWENEWNSQGLLSRLTP
EDYRSRKRARLQKRIEEQLRAAAQPRPDTHGTTRSTSDLAELLNSFGGTTTGGDVLTKGT
RFTHAEKFTFTQEPEKAAQQMAAAASALPSSHQSEEDLKAQQEAELSGLQQQLQQLSVQM
EEVGGDIRQLTVSIHQVSDELKQRELSNSEKEDTVRVKKQTIDLLPDAENNLVKLQSLVE
ASAKRVVHLAAQWEKHRAPLIDEHRRLKELCSNREMESSRKLSEIKDLHDKIRQSAEEAK
KKEGLYKQLITEYETLPKDVSRSAYTMRILEIVSNIKKQKEEITKILSDTKDLQKEINGL
TGKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLE
EQIETENGKKTVSNLEKILEDYKAIRQENSALAAKIRDG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttgatcggattttaatccactccttaaaacaggctggcacagacattgat
gaagatgtgcagagtgttaagcagttctccagtgagctgatagtggaagctgtggtgcga
tgcctgcgtgtgatcgacccaggcctgggcagcggcctgtcccctacgctgcctcctggc
atgtctgcccgcttcagactgggcatgagcctggcccaagcctgccaggatttgggctac
aaaggtgaaattggctaccagacgtttctgtacagcaatgagccggagatacgctctctg
ctcatgttcctggtggagaagctgcccagagagagcgcagaagcctcagaccagccagca
gggaagtctgttcttctgcagaaagccatcgcagcccagattaaagctcagctggccttg
ccttggctccctccgtcctgcagactgcccctccaccgtaaaacacagagtccaggtctt
tgtcacagttttcgtgcacagccgctcagtctcccatactcgcagaaagcttctaccaag
aaacaagctaaagaggtgaaagagtactggagggagcatttggtgccggtgacatcccag
ccttcccatcgtgcctcaattcttgcttcactgttggagaaccatgtttctgaactcagc
gccgctcaggagtgggagaacgagtggaacagtcaaggccttctgtccagactaacacct
gaggactaccgctctaggaaacgagcgaggttgcagaagagaatcgaggagcagctcaga
gcagctgcacagcctcggcccgacacccacggcaccacacgctcgacctctgacctcgcc
gagctgctgaactctttcggagggacgaccacagggggagatgtcctgactaaaggcacg
cgcttcacccacgctgagaaattcactttcacacaggagcctgaaaaagcagcccagcag
atggcagcagcagcaagtgcacttcccagctcgcaccaatctgaggaggacctgaaggcc
cagcaggaggcggagctgtctggcctccagcagcagcttcagcagctgtctgtccaaatg
gaggaggtgggaggagacatcagacagctcacagtgtccattcatcaggtgtctgatgag
ctgaaacagagagagctgagtaattcagagaaggaggacacagtcagagtgaagaaacag
accatcgaccttctgccggatgctgagaataacctggttaaattacagagcctggtggag
gctagcgctaaacgagtggttcatttggctgcacaatgggagaaacacagagcaccacta
attgatgaacaccgtcgactcaaagagctctgcagtaacagagagatggagtcctccagg
aagttatctgaaatcaaagacctccatgataaaatccggcagtctgcagaggaggctaaa
aagaaggagggcctttataaacagctgataacagagtacgagactttgcctaaagatgtc
tctcgttcagcctacaccatgaggatcctggagattgtcagcaacattaagaaacagaag
gaggaaatcacaaagattttgtcagacactaaggatttgcagaaagagattaatggactg
acggggaagctcgacagaacctttgctgtaacagatgagctggtttttaaggatgccaag
aaagatgagtctgttcggaaatcttataagtacctggctgccttacatgagaactgcacc
cagcttattcagaccattgaggatacaggaactatcatgagagagatcagagaccttgag
gaacagattgagaccgagaatggtaagaagactgttagtaacctggagaagattctggaa
gactataaagctattcgtcaggaaaactccgccctagctgccaagatcagggacggctaa
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