Astyanax mexicanus (Mexican tetra): 103042913
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Entry
103042913 CDS
T05042
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103042913 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
103042913 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103042913 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103042913 (gtf2h4)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103042913 (gtf2h4)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103042913 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
103042913
NCBI-ProteinID:
XP_015456360
Ensembl:
ENSAMXG00000017868
UniProt:
A0A8B9HNE6
LinkDB
All DBs
Position
23:complement(16207332..16225434)
Genome browser
AA seq
467 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPDILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDHPLP
QAAVALWVKKDSQKDHDQCVSVLTGLRLWHNQQLQGGLQGIVLNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
EAGDAPCITSAGFQFLLLDTASQLWYITLQYLNTVQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLQTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTANSSSSSSSSTAV
SAMSGTGESGFIVVETNYRVYAYTDSELQIALVALFSEMLYRLSNVVVAQVTRESVQQAI
ANGITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQ
ADFEVLRDRAQGLGVLVWQNAPHRVMVVTPHGHSEVKRFWKRQKSHT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagagtacagctacagtgcaaaaaccttcatgagtacctgagagaactgagc
cctgacatcctcgacagactctacaaccatccagcaacatgtctggctgtttacagggaa
cttccgtcactggccaaaaattacgtaatgcgcatgctgttcttggaccacccgttacca
caggctgcagtagctttgtgggtcaaaaaggacagccagaaggatcatgaccagtgtgtg
tcagtgttgactgggctcagactgtggcataaccagcagcttcaggggggcctccagggc
atcgttctaaaccctgtgtttaaagacaacctgaggatagcactgcttggaggcggtaaa
gcgtgggcagatgagggcagcagtctggggcctgatcggcatgcacgagatgtagagagt
ctggaccgttacgccatggagcgctgggaggtgatccttcacttcatggtgggttccccc
agtgcagcggtcagccaagacctggcccagctccttattcaggccggcctcatgaagagc
gaggctggtgacgcgccatgcatcacttcagctggattccaattcctcctgctggacaca
gcctctcagctgtggtacatcactctgcagtacctcaacactgtccagtctagagggatg
gacctcgttgagattctttccttcttgttccagctgagtttctccactcttggaagggac
tattctgtggaaggaatgagcgagtctttgcagacgtttcttcagcacctacgagagttt
ggcttggtgttccagaggaagaggaagtcgagaagatattacccgacaaggctggctata
actctagcggccggtgtcactgccaactcttcatcctcctcttcctcatccacggctgtg
agcgcaatgtctggaacaggagagtctggcttcattgtggtagaaaccaactatcgtgtg
tatgcttacacagactctgagctgcagatcgctctggttgctctgttcagcgagatgctc
taccgcttatctaacgtggtcgtggcccaggtcaccagggagtctgtgcagcaggctatc
gctaatggcatcactgcacagcagataatccacttcctgaggacaagggcacatcctgtt
atgctcaaacagactccagtgcttcctcctactatcacagaccagatcagactgtgggag
cttgaaagagatcggcttcagtttacagaaggagtattgtacaaccagttcctgtcacag
gctgattttgaggttctgcgggatagagctcagggactgggtgtgctggtgtggcagaat
gcacctcacagggttatggtggttacaccccatgggcacagtgaggtaaagaggttctgg
aagagacagaagagtcatacatag
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