Astyanax mexicanus (Mexican tetra): 103043631
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Entry
103043631 CDS
T05042
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex04141
Protein processing in endoplasmic reticulum
amex04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103043631 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103043631 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103043631 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103043631 (sec13)
04131 Membrane trafficking [BR:
amex04131
]
103043631 (sec13)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103043631 (sec13)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103043631 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103043631 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
103043631 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
103043631
NCBI-ProteinID:
XP_007251556
Ensembl:
ENSAMXG00000004356
UniProt:
A0A8B9JUZ0
LinkDB
All DBs
Position
22:complement(981427..990950)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYEFGLIL
ACGSSDGAISILTYTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPLYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLTTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWSCIS
DVNKSQGGLSSITDTQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaattaatacagtggatacctcacacgaggacatgatccatgatgcccag
atggactactatggcacacgactggcgacctgctcctctgatcgctctgtgaagatcttt
gatgtaaagaatggaggacagattcttgtggctgatttgagggggcatgaaggtccagtg
tggcaggtagcctgggctcatccaacctacggcaacatcctggcctcctgttcctatgac
cgaaaagtcattatctggaaagaggagaacgggacatgggataagatgtacaaatacaca
ggccacaactcctcagtgaactctatctgctgggggccgtatgagtttggtttgattctg
gcttgtggaagctctgatggcgcgatttcaattctgacctacaccggtgacggacagtgg
gacattaagaagattaataatgcacacactattggctgtaatgcagtgagctgggctcca
gccgtggttccaggaagtcttatagaccagcccacaggacagaaacccctctacatcaag
agattcgtctccgggggctgcgacaacttagtcaagctgtggaaagaagaggacggccaa
tggaaggaggaccagaaacttgaagctcacagtgattgggtgagagatgtagggtgggct
ccatctattggactgaccaccagcacaatcgccagctgctcacaggacggtagggtgttt
atctggacgtgtgacgatccctccggaaacacctggaccgctaaactcctgcacaaattc
aacgacgtggtctggcacgtgagctggtccatcaccgggaacatcctggcagtatctgga
ggagacaacaaggtgacgctgtggaaggagtcggtggacggacagtggtcctgcatcagt
gacgtcaataagagccaggggggcttgtcctccatcacagacacccagcagaacgagcag
tga
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