Astyanax mexicanus (Mexican tetra): 103045177
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Entry
103045177 CDS
T05042
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103045177 (rbfox1l)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103045177 (rbfox1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
103045177
NCBI-ProteinID:
XP_007256931
Ensembl:
ENSAMXG00000010470
UniProt:
W5KT89
A0A8B9K635
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All DBs
Position
6:complement(26532647..26550292)
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AA seq
382 aa
AA seq
DB search
MLSSPTVILQPYGLPVYPQTASCYPSLVQGAPAQEAGPGTGDPALPQVYAPPPSYPPPGQ
APPTPAGRLPPLDFSSAHASSEYQDHHQLRVYQGAQHEGAEPLTASSTDDALAPVTSDPQ
PLSASVASGGGAGSGGEEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFENAVEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAAGW
KINPVMGAMYAPELYTVASFPYPVPTPTLAYRGSALRGRGRAVYNTIRSAATAATPAAVP
AYPGVVYQEGLYGTEVYGGYPATYRVAQSPSAAATAAYSDGYGRVYATATDPYHHSVGPT
TTYGVGTMASLYRGGYNRFTPY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctctcctactgtcattctacagccttacggactgcctgtgtacccacaaact
gcctcctgctaccccagcttagtacagggtgcccctgcccaggaggcaggaccgggcact
ggtgaccctgccctgcctcaggtatatgccccacccccttcatatccacctcctggacag
gcccctcccacacctgccggcaggctcccacccctcgatttcagctccgcccacgccagc
tcggaataccaggaccaccaccagttaagagtctaccagggagctcagcatgagggggcg
gagcctttaactgctagtagcacggatgacgccctggcccctgtgacctctgacccacag
cctctgagtgcctccgttgcgagtggtggcggagctggaagtgggggtgaggaggagggg
tcaggtaaagcccagcccaaaaggcttcacgtgtccaacataccattccgattccgtgac
ccggacctgaggcagatgtttgggcaatttggcaagattctggatgtggagatcatcttc
aatgagagagggtcaaagggttttggatttgtgacgtttgaaaatgcagtggaagctgat
cgagcccgagagaaactcaatggcacaatcgtggaaggcagaaagattgaggttaacaac
gccacggccagggtagtgaccaagaagccacagaccccacttgtcaatgctgctgggtgg
aagattaatccagtaatgggagccatgtatgcccctgaactttatactgttgccagcttc
ccctatcctgttcccacaccaaccttggcatatagaggctccgcccttcgggggcgtggt
cgtgcagtgtacaacacaattcgctctgcagccacagcggccacccctgctgctgttcca
gcctatccaggggtcgtttatcaagaaggtctttatggaacggaagtttatggaggatat
cctgccacataccgggttgctcagtccccttcagctgcagccacagccgcttacagtgac
gggtatgggcgagtgtatgccactgcaactgacccttaccatcactctgtcgggccgacc
accacttacggagtaggaactatggcaagtttgtatcgtggaggctacaatcgctttacc
ccttattga
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