Astyanax mexicanus (Mexican tetra): 103045208
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Entry
103045208 CDS
T05042
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103045208
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103045208
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
103045208
NCBI-ProteinID:
XP_022538631
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All DBs
Position
23:complement(1622844..1769617)
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AA seq
365 aa
AA seq
DB search
MANSGCVLLSGSGMFPHFPAAFLYLPEGNQEATNPVDAMAQSYTPAQFPPPPQNGIPGEF
AAPHALPTQDFTGQNRVPEHTLTLYTPTQTHSDPTANDSTTPTITANTNSAPTDDVTQTE
SSQQLTLQSSDSPEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGF
GFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKAANPYTNGWKLNPVVGAV
YAPELYAVTGFPYPPAGAAVAYRGAQLRGRGRAVYNTFRTAAPPPPIPAYGAVVYQDGFY
GAEIYGGYAAYRYAQPTTATAYSDSYGRVYATADPYHHSIAPTTTYSVGTMASLYRGAYS
RFTPY
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactccggctgtgttctcctctccggctcgggaatgttccctcacttccctgca
gctttcctctacctgcccgagggtaaccaagaggcgaccaatccagtggatgcgatggct
cagtcctacaccccggcgcagttccccccacccccacagaacggtattccgggagagttc
gccgcaccccacgcccttcccacacaggacttcacaggacagaaccgagtaccggaacac
accctgaccctctacacacccacacaaacacacagcgacccaacagccaacgacagcacc
acgccaaccatcaccgccaacaccaacagtgctccgacagatgatgtgacgcaaacagag
agttcccagcagttgacgctgcagtcctcagactctccagagaaacagcagcccaagcgc
ctccacgtctccaacatccccttccgcttccgggacccggacctcagacagatgttcggg
caatttgggaagattttagatgtggagatcatttttaatgaaaggggatctaagggcttt
gggtttgtaacttttgaaacgagcacagatgcagatcgagcgcgggagaaactaaacggt
acaatcgtagagggacgcaagatcgaggtgaataacgccacagcgagagtgatgacaaat
aaaaaggcagctaacccatacacaaacggctggaagctgaacccggtggtgggagccgtt
tatgcacctgaactctacgcagtaacaggttttccctacccccctgctggagctgcagta
gcgtatagaggagctcagctcagagggagaggaagagctgtgtacaacaccttccgcaca
gcagcgccacctccacccataccagcgtacggagcggtggtatatcaagatggtttctac
ggtgctgagatctacggaggctatgcagcgtacagatatgcccagcccaccacagctact
gcatacagtgacagctatgggagagtctatgcaacagcagatccttaccaccactcgatc
gcccccaccaccacgtacagtgtgggcaccatggctagcctctaccgcggagcgtacagt
cgcttcacgccctactaa
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