Astyanax mexicanus (Mexican tetra): 103045874
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Entry
103045874 CDS
T05042
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103045874 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045874 (depdc5)
Membrane trafficking [BR:
amex04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
103045874 (depdc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
103045874
NCBI-ProteinID:
XP_022536846
Ensembl:
ENSAMXG00000017289
LinkDB
All DBs
Position
20
Genome browser
AA seq
1604 aa
AA seq
DB search
MTVTTKTKTYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVKS
LKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWRL
KKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQM
SCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYAAKSLDEFPES
QRGSIRQDHEGRFYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKGADGFPCGQ
NSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRM
IDNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLDDYNLPHWINHSFYTSKSQGSSSC
FTPRIKLAGRKLHAEKSKSSKDHSLGAQKDSENSLPIQVDYDAHDAQVFRLPGPSRAQRS
TNFRSNRDRESSRKSWGPAELSIGTGCSPPVRPAGGPDEQRSLASDDSLGHISNMLLIPR
QVHGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHIRPGGYTPQRAL
INPFAPSRMPMKLTSNRRRWMHTFPVGPTGEAIQIHHQTRQNMAELQGSEQRDPAHTSAE
LLELAYHEATGRRTVSRQTGENGLYISGGIDDYSGSPASSNSTGTPVNRGSFEEYSSSPD
PTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHTD
LDRRDDEAPIMTAPRVFEEFICQRLMQGYQIIVQPNSRKAPPTVVPPLSSSPLYSRGLVS
RRKAEEEESLFWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYSLCPPHAEGHF
VPCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGE
GHWDVYGDGPGAGRDGSGASGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGAAIKGLQV
TSPLSAYTPEPIAPPLGKKGASALSTLLELDQTHKSQDEQIVSQHAAAVGKVTAPFSEAA
SVVMATTYVDSPRKDAGFMLDFIRSPRSSYLSHSQIPAEPPAAVPADSAVSERGGSQLSD
RPAGGATGTGEPASGTASDSGSQQGSLSLSSSSTLLEILEAIKHPTTGVQLLPEQKGLPP
NCFISAEVVHWLMNTVENVATQGIAVEIMQKMLDDGLVAHASGDAMRTFIYGFYFYKIVD
KESDKVPTNQLPPAGVWSTAAVEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRAEWCSCYYQGNFSLN
SAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQLFI
PLNIQSLLRDSSDSLFDGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPAENKPQ
YIHVTGTVFMQLPYSKRKYSCGQQRRRRNSASSASQSLFGCEERVGYNWAYNTMLTKAWR
TGVLGDEKLADRLLRDFTDFCSNKDNRLVAFWDSCVDKMNSSAP
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaccaccaagaccaagacctacaagctggtggtccacaagaagggcttcgga
gggagcgatgatgagctgatgatgaacccgaaggtgttccctcaggttaaactgggggac
attgtggagatcgcgcatccaaacgatgagtacagtcctctcttgctacaggtgaaaagc
ctgaaagaagatctgcagaaagagacgatcagtgtggaccagactgtggctcaggccttc
aagctgcgagcgtatcaggacgtcattataaacatcgtggaccccaaggatgtgactctg
gatctggtggaactgacctttaaagatcagtacatcggccgaggagacatgtggagactc
aagaagagtctggtgagcacgtgcgcgtatgtgacccagaaagtggagtttgctggaatc
agggctcaggcgagtgagctgtgggtgaagggggagaaggtcacgtgtggatacatcagt
gaggacacgcgggtggtgtttcgctccacctcagcgatggtgtacatcttcatccagatg
agctgtgagatgtgggactttgatatctatggtgatctctattttgaaaaggctgtgaat
ggcttcctctctgatctgttcgccaagtggaaagagaagaactgcagccatgaggtgacg
gtggttcttttctcacgtaccttttatgctgctaaatctctcgatgagtttcctgagagc
cagagaggatctatcaggcaggatcatgaaggacgcttttatgaagatttctacagagtg
gtggctcagaacgagaggagggacgagtggacgtctctgctgatcactattaagaagctc
ttcatccagtaccctgtcctggttcgccttaaaggagcagacgggtttccctgtggtcag
aactctactgctgctcaggggaattatctagaagcgataaacctctccttcaacgtgttt
gataagcattacatcaaccgtaactttgaccgcactggtcagatgtctgtggtcatcact
ccgggagtgggcgtgttcgaagttgaccggctcctgatgatcctcaccaaacagcgcatg
atcgacaacggtattggtgtggatctggtgtgtatgggagaacagcccctccatgctgtt
ccactgtttaagttacacaaccgcacggtacccggcgactcgagactggatgactacaat
ctgccccactggattaatcacagcttctacacctcgaagagtcagggctcgtccagctgt
ttcacaccaaggattaaacttgccggacgcaagcttcatgctgaaaaatccaagagcagt
aaagatcactctctaggagctcagaaggactcggagaacagtctgcccatacaggtggac
tacgatgcccatgatgctcaggtgttcagactgcctggaccctccagagctcagaggagc
accaacttcaggtccaacagggacagagagtccagtaggaagagctggggtccggcggag
ctgagcatcggtactggctgctcccccccggtgcgtccagcagggggtccggacgagcag
cgcagcctggcttcagacgacagtctgggacacatctccaacatgctgctcatcccccgg
caggtccacggccagtacgaggtcagcagctcgctcggatacaccagctgcaccagagag
ctgttggagaagatggtggagtctcagcgggactccagcgctccgggtcggttcactgtg
ggcagcgcagagtccacgctgcacatccggccgggcgggtataccccccagcgagccctc
atcaaccccttcgccccctcacgcatgcccatgaagctcacctccaaccgcagacgctgg
atgcacactttccctgtgggtccgaccggcgaggccattcagattcaccatcagacgcgg
cagaacatggctgagctgcagggcagcgagcaacgagaccccgcccacacctccgccgag
ctgctggagctggcctatcacgaggccacgggcaggagaacagtttctcgtcagactgga
gagaacgggctgtatatcagtggagggattgatgattactctggtagtcctgctagcagc
aatagcacaggaacacctgtgaaccgtggctcattcgaagagtattccagcagcccagac
ccaaccctgctgctgtctgcacccccgacagtgcctagtttctgctgtacggtgggggtg
gactggaagtctttgaccacgcccgcctgcctccccctgaccaccgactacttccccgac
cgccagaccctgcagaacgactacaccgagggctgctacgacctgctgccccacaccgac
ctcgacaggcgtgatgacgaggctcctataatgacggctcctcgtgtgtttgaggagttt
atctgtcagagactgatgcagggctaccagatcatcgtccagcccaatagcagaaaagcc
ccgcccactgtggtcccgcccctcagcagcagccccctctactccagagggctggtctct
cggaggaaggcggaggaggaggagagcctgttttggctcagtatgggcagaaccttccat
aaagtctgcctgaaagacaaaatcatcactgtcacccgttaccttcccaagtatccgtac
gagtctacacagatccagtacagctacagtctgtgtcctcctcatgctgagggtcatttt
gttccctgctgggtggagttcggtcacgagcggctggaggagtataagtggaactatcta
gatcagtacatctgctctgctggctctgaggacttcagcctcatcgactctctgaagttc
tggcggacgcgcttcctcctgctgcctgcggggggagccaggcgcgtggcggacggcgag
ggacactgggacgtttacggggacgggccgggggctgggcgggacggctccggggcctct
ggggactgggctctgttggacggatttatccgcttcctggagggactgaacaggatccgg
cgccgccatcgatccgaccgcatcatccggaaaggtgctgctataaagggtcttcaagtg
accagccctctgtctgcctatactccagagcctatagcgccccctctgggcaagaaagga
gcttcagccctctccacccttctggagctggaccagacacacaaatctcaggatgagcag
attgtatctcagcatgctgctgctgtggggaaagtaacggcgcccttcagtgaggctgcc
tctgttgtcatggcaaccacttacgtagacagtccccggaaggacgctggcttcatgttg
gattttattcgtagccctcgctcctcctatctctctcactctcagattcctgctgagcct
cctgcagccgtccctgcagactctgcagtatcagagcgaggaggaagtcagctgagtgat
cggccagcggggggcgctacgggcacaggagagccagcctcgggcactgcctctgactct
gggagtcagcagggcagtctgagtctgtcgtcctcctccacactgctggagatcctggag
gctatcaaacacccgactactggtgtgcagctgctcccggagcagaagggccttcctccg
aactgcttcatcagtgctgaggtggttcattggctgatgaacacggtggagaacgtggcc
actcagggcatcgccgtagagatcatgcagaaaatgctggatgatggtttggtagctcac
gcatctggagatgcaatgcgcacctttatctatggcttctacttctacaagatcgtggat
aaggagagcgataaggtacccaccaatcagctgcctccggctggcgtgtggtcgacagcg
gcggtggaggactttgcgctgtttcagaggaagtggttcgaggtggcgtttgtgctggag
gagaggcggccgtgcgacctgcccgcgttcctgctgccctggctgcccagccgcccggcg
tcgtacgcaagtaggcacagctccttcagccgcagcttcggaggacgcagccaggccgcc
gccctgctagctgcgacggtgccggagcagaagacggtgactctggatgtggatgtgaat
aaccgcagtgatcgggctgagtggtgcagttgttactatcagggaaacttctctctaaac
tccgccttcgagatcaagctgcactggatggccgtcactgccgccgtgctgttcgagatg
gtgcagggctggcacaggaaggcggcgtcgtgcgggttcctgctggttccggttctggag
gtgccgttcgctctgccgtcgtatctgtacggagatcctctcagagcccagctcttcatc
cccctcaacatccagagcctgctgagggactccagcgacagcctgttcgacgggtttgag
ccggaaacatactgggacaggatgcagctcttccaggaggccattctctacaggttcgga
tttgttcaggataaattttctgcctcagctttcaacttccctgctgaaaacaagccccag
tatatccacgtcacaggtacagtgttcatgcagctgccgtactctaagaggaagtactca
tgcggtcagcagcggcggcggcgtaactccgcctcctcggcaagtcagagtctgttcggc
tgcgaggagcgagtcggttacaactgggcgtacaacaccatgctgaccaaagcctggaga
accggcgtgctgggggacgagaaactcgccgaccgtctcctccgagacttcaccgacttc
tgctccaacaaggacaaccggctggtggccttctgggacagctgtgtggacaaaatgaac
tctagcgccccctga
DBGET
integrated database retrieval system
