Astyanax mexicanus (Mexican tetra): 103045874
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Entry
103045874 CDS
T05042
Symbol
depdc5
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103045874 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045874 (depdc5)
Membrane trafficking [BR:
amex04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
103045874 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
DEP
Motif
Other DBs
NCBI-GeneID:
103045874
NCBI-ProteinID:
XP_022536846
LinkDB
All DBs
Position
20:complement(16139137..16211871)
Genome browser
AA seq
1603 aa
AA seq
DB search
MTVTTKTKTYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVKS
LKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWRL
KKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQM
SCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYAAKSLDEFPES
QRGSIRQDHEGRFYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKGADGFPCGQ
NSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRM
IDNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLDDYNLPHWINHSFYTSKSQGSSSC
FTPRIKLAGRKLHAEKSKSSKDHSLGAQKDSENSLPIQVDYDAHDAQVFRLPGPSRAQRS
TNFRSNRDRESSRKSWGPAELSIGTGCSPPVRPAGGPDEQRSLASDDSLGHISNMLLIPR
QVHGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHIRPGGYTPQRAL
INPFAPSRMPMKLTSNRRRWMHTFPVGPTGEAIQIHHQTRQNMAELQGSEQRDPAHTSAE
LLELAYHEATGRRTVSRQTGENGLYISGGIDDYSGSPSSNSTGTPVNRGSFEEYSSSPDP
TLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHTDL
DRRDDEAPIMTAPRVFEEFICQRLMQGYQIIVQPNSRKAPPTVVPPLSSSPLYSRGLVSR
RKAEEEESLFWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYSLCPPHAEGHFV
PCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEG
HWDVYGDGPGAGRDGFGASGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGAAIKGLQVT
SPLSAYTPEPIAPPLGKKGASALSTLLELDQTHKSQDEQIVSQHAAAVGKVTAPFSEAAS
VVMATTYVDSPRKDAGFMLDFIRSPRSSYLSHSQIPAEPPAAVPADSAVSERGGSQLSDR
PAGGATGTGEPASGTASDSGSQQGSLSLSSSSTLLEILEAIKHPTTGVQLLPEQKGLPPN
CFISAEVVHWLMNTVENVATQGIAVEIMQKMLDDGLVAHASGDAMRTFIYGFYFYKIVDK
ESDKVPTNQLPPAGVWSTAAVEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRAEWCSCYYQGNFSLNS
AFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQLFIP
LNIQSLLRDSSDSLFDGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPAENKPQY
IHVTGTVFMQLPYSKRKYSCGQQRRRRNSASSASQSLFGCEERVGYNWAYNTMLTKAWRT
GVLGDEKLADRLLRDFTDFCSNKDNRLVAFWDSCVDKMNSSAP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaccaccaagaccaagacctacaagctggtggtccacaagaagggcttcgga
gggagcgatgatgagctgatgatgaacccgaaggtgttccctcaggttaaactgggggac
attgtggagatcgcgcatccaaacgatgagtacagtcctctcttgctacaggtgaaaagc
ctgaaagaagatctgcagaaagagacgatcagtgtggaccagactgtggctcaggccttc
aagctgcgagcgtatcaggacgtcattataaacatcgtggaccccaaggatgtgactctg
gatctggtggaactgacctttaaagatcagtacatcggccgaggagacatgtggagactc
aagaagagtctggtgagcacgtgcgcgtatgtgacccagaaagtggagtttgctggaatc
agggctcaggcgagtgagctgtgggtgaagggggagaaggtcacgtgtggatacatcagt
gaggacacgcgggtggtgtttcgctccacctcagcgatggtgtacatcttcatccagatg
agctgtgagatgtgggactttgatatctatggtgatctctattttgaaaaggctgtgaat
ggcttcctttctgatctgttcgccaagtggaaagagaagaactgcagccatgaggtgacg
gtggttcttttctcacgtaccttttatgctgctaaatctctcgatgagtttcctgagagc
cagagaggatctatcaggcaggatcatgaaggacgcttttatgaagatttctacagagtg
gtggctcagaacgagaggagggacgagtggacgtctctgctgatcactattaagaagctc
ttcatccagtaccctgtcctggttcgccttaaaggagcagacgggtttccctgtggtcag
aactctactgctgctcaggggaattatctagaagcgataaacctctccttcaacgtgttt
gataagcattacatcaaccgtaactttgaccgcactggtcagatgtctgtggtcatcact
ccgggagtgggcgtgttcgaagttgaccggctcctgatgatcctcaccaaacagcgcatg
atcgacaacggtattggtgtggatctggtgtgtatgggagaacagcccctccatgctgtt
ccactgtttaagttacacaaccgcacggtacccggcgactcgagactggatgactacaat
ctgccccactggattaatcacagcttctacacctcgaagagtcagggctcgtccagctgt
ttcacaccaaggattaaacttgccggacgcaagcttcatgctgaaaaatccaagagcagt
aaagatcactctctaggagctcagaaggactcggagaacagtctgcccatacaggtggac
tacgatgcccatgatgctcaggtgttcagactgcctggaccctccagagctcagaggagc
accaacttcaggtccaacagggacagagagtccagtaggaagagctggggtccggcggag
ctgagcatcggtactggctgctcccccccggtgcgtccagcagggggtccggacgagcag
cgcagcctggcttcagacgacagtctgggacacatctccaacatgctgctcatcccccgg
caggtccacggccagtacgaggtcagcagctcgctcggatacaccagctgcaccagagag
ctgttggagaagatggtggagtctcagcgggactccagcgctccgggtcggttcactgtg
ggcagcgcagagtccacgctgcacatccggccgggcgggtataccccccagcgagccctc
atcaaccccttcgccccctcacgcatgcccatgaagctcacctccaaccgcagacgctgg
atgcacactttccctgtgggtccgaccggcgaggccattcagattcaccatcagacgcgg
cagaacatggctgagctgcagggcagcgagcaacgagaccccgcccacacctctgccgag
ctgctggagctggcctatcacgaggccacgggcaggagaacagtttctcgtcagactgga
gagaacgggctgtatatcagtggagggattgatgattactctggtagtcctagcagcaat
agcacaggaacacctgtgaaccgtggctcattcgaagagtattccagcagcccagaccca
accctgctgctgtctgcacccccgacagtgcctagtttctgctgtacggtgggggtggac
tggaagtctttgaccacgcccgcctgcctccccctgaccaccgactacttccccgaccgc
cagaccctgcagaacgactacaccgagggctgctacgacctgctgccccacaccgacctc
gacaggcgtgatgacgaggctcctataatgacggctcctcgtgtgtttgaggagtttatc
tgtcagagactgatgcagggctaccagatcatcgtccagcccaatagcagaaaagccccg
cccactgtggtcccgcccctcagcagcagccccctctactccagagggctggtctctcgg
aggaaggcggaggaggaggagagcctgttttggctcagtatgggcagaaccttccataaa
gtctgcctgaaagacaaaatcatcactgtcacccgttaccttcccaagtatccgtacgag
tctacacagatccagtacagctacagtctgtgtcctcctcatgctgagggtcattttgtt
ccctgctgggtggagttcggtcacgagcggctggaggagtataagtggaactatctagat
cagtacatctgctctgctggctctgaggacttcagcctcatcgactctctgaagttctgg
cggacgcgcttcctcctgctgcctgcggggggagccaggcgcgtggcggacggcgaggga
cactgggacgtttacggggacgggccgggggctgggcgggacggcttcggggcctctggg
gactgggctctgttggacggatttatccgcttcctggagggactgaacaggatccggcgc
cgccatcgatccgaccgcatcatccggaaaggtgctgctataaagggtcttcaagtgacc
agccctctgtctgcctatactccagagcctatagcgccccctctgggcaagaaaggagct
tcagccctctccacccttctggagctggaccagacacacaaatctcaggatgagcagatt
gtatctcagcatgctgctgctgtggggaaagtaacggcgcccttcagtgaggctgcctct
gttgtcatggcaaccacttacgtagacagtccccggaaggacgctggcttcatgttggat
tttattcgtagccctcgctcctcctatctctctcactctcagattcctgctgagcctcct
gcagccgtccctgcagactctgcagtatcagagcgaggaggaagtcagctgagtgatcgg
ccagcggggggcgctacgggcacaggagagccagcctcgggcactgcctctgactctggg
agtcagcagggcagtctgagtctgtcgtcctcctccacactgctggagatcctggaggct
atcaaacacccgactactggtgtgcagctgctcccggagcagaagggccttcctccgaac
tgcttcatcagtgctgaggtggttcattggctgatgaacacggtggagaacgtggccact
cagggcatcgccgtggagatcatgcagaaaatgctggatgatggtttggtagctcacgca
tctggagatgcaatgcgcacctttatctacggcttctacttctacaagatcgtggataag
gagagcgataaggtacccaccaatcagctgcctccggctggcgtgtggtcgacagcggcg
gtggaggactttgcgctgtttcagaggaagtggttcgaggtggcgtttgtgctggaggag
aggcggccgtgcgacctgcccgcgttcctgctgccctggctgcccagccgcccggcgtcg
tacgcaagtaggcacagctccttcagccgcagcttcggaggacgcagccaggccgccgcc
ctgctagctgcgacggtgccggagcagaagacggtgactctggatgtggatgtgaataac
cgcagtgatcgggctgagtggtgcagttgttactatcagggaaacttctctctaaactcc
gccttcgagatcaagctgcactggatggccgtcactgccgccgtgctgttcgagatggtg
cagggctggcacaggaaggcggcgtcgtgcgggttcctgctggttccggttctggaggtg
ccgttcgctctgccgtcgtatctgtacggagatcctctcagagcccagctcttcatcccc
ctcaacatccagagcctgctgagggactccagcgacagcctgttcgacgggtttgagccg
gaaacatactgggacaggatgcagctcttccaggaggccattctctacaggttcggattt
gttcaggataaattttctgcctcagctttcaacttccctgctgaaaacaagccccagtac
atccacgtcacaggtacagtgttcatgcagctgccgtactctaagaggaagtactcatgc
ggtcagcagcggcggcggcgtaactccgcctcctcggcaagtcagagtctgttcggctgc
gaggagcgagtcggttacaactgggcgtacaacaccatgctgaccaaagcctggagaacc
ggcgtgctgggggacgagaaactcgccgaccgtctcctccgagacttcactgacttctgc
tccaacaaggacaaccggctggtggccttctgggacagctgtgtggacaaaatgaactct
agcgccccctga
DBGET
integrated database retrieval system
