Astyanax mexicanus (Mexican tetra): 111192966
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Entry
111192966 CDS
T05042
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
111192966
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111192966
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111192966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
DUF1722
ATG17_like
CLZ
DUF7310
CdvA
DUF6468
CRLF3_N
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
111192966
NCBI-ProteinID:
XP_022527142
Ensembl:
ENSAMXG00000030443
LinkDB
All DBs
Position
19
Genome browser
AA seq
554 aa
AA seq
DB search
MENTEEGISPKKMPEGIQPGMENHQEETNLAPESKDPKEEATKSQEEEEEDQIDACNGTT
NASTNGTTNSPTDPPTVEVTCDSCMENPRLASKSCLTCQVSYCEEHLRPHLENSKFQTHK
LVEPQLDMELRTCPHHHLDLELYCTTDSCCICASCGSEGHHGHSIVPIGEARKQIEGDLQ
QKQKEMVKKLSAAEQAITKLQGNTESIESSVTGVRAEIEQQFSDLQAAVEDAQKSTLDVL
EGEYKQALGQAESIQAHIEQRITELKKTMAQVERLPRKKNDVDFLQEYTEWRKGLVDVCL
PGVYISLIDQLDTFSRIVKETTKNLCEQLTSTYSAQLKELCESEKLSIKTMVQPSSPTKR
QSSEQEPITREDFLKYASNLTFNPDSTHKFLRLTEDNRKASNTTPWQHNYPDTPDRFEHW
RQVMTCESLYLGRHYFEVELTGEGAYLGLTYKSIDRKGQESSSCITGNDFSWSFGRESHG
YSAWHCDAETPVEVGEFSRIGLYMDYEKGLLAFYGVADTMNLLHMFTTNYLEPLYPVFWL
SKKDNKVVLVKPGD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacggaagagggcatctcacccaaaaagatgccagagggcatccagcctggc
atggagaaccaccaagaagaaaccaacctggctccagaatccaaagatcccaaagaagag
gcaacaaaatcccaagaagaagaagaagaagatcagatagatgcttgtaatggtaccacc
aacgcttccaccaatggtaccaccaattcccccaccgatccaccaactgtggaagtgacc
tgcgactcctgcatggagaaccctcgcctggcctccaagtcctgcctcacctgccaggtg
tcctactgtgaggagcacctgaggcctcacctggagaacagcaagttccagacccacaag
ctggtggagccacagctggacatggagctgcgcacctgcccgcatcaccacctggacctg
gagctgtactgcaccaccgacagctgctgcatctgcgccagctgtggaagcgaagggcac
cacgggcacagcatcgtacccataggagaggcccgcaagcagatagagggagatctccag
cagaaacagaaagagatggtgaagaagttgtctgcagcggagcaggccatcaccaaactg
cagggaaacacagagtccatagagagctctgtgacgggggtacgagctgagatcgagcag
cagttctcagacctgcaggcggcggtggaggacgctcagaagagcacgctggatgttctg
gagggggagtataaacaggccctgggtcaggcggagagcatccaggcccacatcgagcag
aggatcactgagctgaagaagaccatggcccaggtggagcgacttcctcggaaaaagaac
gatgtggattttctgcaggaatacacagagtggaggaaaggtttggtggacgtttgttta
ccaggggtttacatcagcctcatagaccagctggacactttcagccgaatcgtgaaagaa
accactaaaaacctgtgtgagcagctgacgtccacctacagcgctcagcttaaagagctc
tgtgagagcgagaaactgagcattaagacgatggtgcagccgagctccccgaccaaacgc
cagtcatccgaacaggagcccataactagagaagacttccttaaatacgcctccaatctg
accttcaatcctgactccacccacaaatttctgaggctaactgaggacaacagaaaagcg
agtaacaccacgccctggcagcacaactacccggatacaccggaccgattcgagcactgg
cggcaggtgatgacctgcgagagcctttacctgggccgccattactttgaggtggagcta
acaggtgagggggcgtacctgggcctcacctacaagagcatcgaccgcaaaggccaggag
agcagcagctgcatcaccggtaacgatttctcctggagcttcggacgggaaagccacggc
tactcggcctggcactgcgacgcggagacgccggtggaggtgggcgagttttctcggatc
ggactctacatggactacgagaagggtctgctggccttctacggtgtagccgacaccatg
aacctgctacacatgttcaccactaattatctagaaccactgtaccctgtgttctggctc
tccaagaaagacaataaagtggttctagtcaagccgggtgactaa
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