Astyanax mexicanus (Mexican tetra): 111192966
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Entry
111192966 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
111192966
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111192966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
DUF1722
ATG17_like
Baculo_p48
CLZ
DUF6468
CdvA
BORCS6
4HB_MCP_1
BshC
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
111192966
NCBI-ProteinID:
XP_022527142
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All DBs
Position
7:complement(17807074..17817082)
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AA seq
554 aa
AA seq
DB search
MENTEEGISPKKMPEGIQPGMENHQEETNLAPESKDPKEEATKSQEEEEEDQIDACNGTT
NASTNGTTNSPTDPPTVEVTCDSCMENPRPASKSCLTCQVSYCEEHLRPHLENSKFQTHK
LVEPQLDMELRTCPHHHLDLELYCTTDSRCICASCGSEGHHGHSIVPIGEARKQIEGDLQ
QKQKEMVKKLSAAEQAITKLQGNTESIESSVTGVRAEIEQQFSDLQAAVEDAQKSTLDVL
EGEYKQALGQAESIQAHIEQRITELKKTMAQVERLPRKKNDVDFLQEYTEWRKGLVDVCL
PGVYISLIDQLDTFSRIVKETTKNLCEQLTSTYSAQLKELCESEKLSIKTMVQPSSPTKR
QSSEQEPVTREDFLKYASNLTFNPDSTHKFLRLTEDNRKASNTTPWQHNYPDTPDRFEHW
RQVMTCESLYLGRHYFEVELTGEGAYLGLTYKSIERKGQESSSCITGNDFSWXLRRESHG
YSAWHCDAETPVEVGEFSRIGLYMDYEKGLLAFYGVDDTMNLLHMFTTNYLEPLYPVFWL
SKKDNKVVLVKPGD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacggaagagggcatctcacccaaaaagatgccagagggcatccagcctggc
atggagaaccaccaagaagaaaccaacctggctccagaatccaaagatcccaaagaagag
gcaacaaaatcccaagaagaagaagaagaagatcagatagatgcttgtaatggtaccacc
aacgcttccaccaatggtaccaccaattcccccaccgatccaccaactgtggaagtgacc
tgcgactcctgcatggagaaccctcgcccggcctccaagtcctgcctcacctgccaggtg
tcctactgtgaggagcacctgaggcctcacctggagaacagcaagttccagacccacaag
ctggtggagccacagctggacatggagctgcgcacctgcccgcatcaccacctggacctg
gagctgtactgcaccaccgacagccgctgcatctgcgccagctgtggaagcgaagggcac
cacgggcacagcatcgtacccataggagaggcccgcaagcagatagagggagatctccag
cagaaacagaaagagatggtgaagaagttgtctgcagcggagcaggccatcaccaaactg
cagggaaacacagagtccatagagagctctgtgacgggggtacgagctgagatcgagcag
cagttctcagatctgcaggcggcggtggaggacgctcagaagagcacgctggatgttctg
gagggggagtataaacaggccctgggtcaggcggagagcatccaggcccacatcgagcag
aggatcactgagctgaagaagaccatggcccaggtggagcgacttcctcggaaaaagaac
gatgtggattttctgcaggaatacacagagtggaggaaaggtttggtggacgtttgttta
ccaggggtttacatcagcctcatagaccagctggacactttcagccgaatcgtgaaagaa
accactaaaaacctgtgtgagcagctgacgtccacctacagcgctcagcttaaagagctc
tgtgagagcgagaaactgagcattaagacgatggtgcagccgagctccccgaccaaacgc
cagtcatccgaacaggagcccgtaactagagaagacttccttaaatacgcctccaatctg
accttcaatcctgactccacccacaaatttctgaggctaactgaggacaacagaaaagcg
agtaacaccacgccctggcagcacaactacccggatacaccggaccgattcgagcactgg
cggcaggtgatgacctgcgagagcctttacctgggccgccattactttgaggtggagcta
acaggtgagggggcgtacctgggcctcacctacaagagcatcgaacgcaaaggccaggag
agcagcagctgcatcaccggtaacgatttctcctggnagcttcggcgggaaagccacggc
tactcggcctggcactgcgacgcggagacgccggtggaggtgggcgagttttctcggatc
ggactctacatggactacgagaagggtctgctggccttctacggtgtggacgacaccatg
aacctgctacacatgttcaccactaattatctagaaccactgtaccctgtgttctggctc
tccaagaaagacaataaagtggttctagtcaagccgggtgactaa
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