Actinosynnema mirum: Amir_0682
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Entry
Amir_0682 CDS
T00957
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ami
Actinosynnema mirum
Pathway
ami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amir_0682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_0682
Enzymes [BR:
ami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Amir_0682
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amir_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACU34645
UniProt:
C6WKP0
LinkDB
All DBs
Position
757874..758704
Genome browser
AA seq
276 aa
AA seq
DB search
MDNGRVAGRRVVGRRDAGVGAGAGVGVGAPDGGGAPDGAGDLAAVPDLPELDRRVSGCRA
CPRLVAWREEVARVKRAAFRDQDYWGRPVPGFGGGDARLAVVGLAPAAHGGNRTGRMFTG
DASGEVLYAAMHAVGLANQPEAVSRDDGLRLLGARITAPVKCAPPDNAPTPAERDTCRPW
LERELTLLRPTLRAVVVLGGFGWQSLLPALAAHWTVPRPRPRFTHGARVELPASDDGPPL
VLHGCYHVSRRNTQTGLLTTEMVEEVLSRAKADAGL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggataacgggcgggtggctgggcggcgggtggttgggcggcgggacgcgggggtgggc
gcgggggcgggggttggcgtcggtgcgcccgacgggggcggtgcgcccgacggggccggt
gacctggccgccgtgccggacctgccggagctggaccgccgggtgagcggctgccgggcg
tgcccgaggctggtggcgtggcgcgaggaggtggcgcgggtcaagcgggccgcgttccgc
gaccaggactactggggcaggccggtgccgggcttcggcggcggtgacgcgcgcctggcc
gtggtgggcctggccccggccgcgcacggcggcaaccgcaccggccggatgttcaccggc
gacgcctccggcgaggtcctgtacgcggcgatgcacgcggtgggcctggcgaaccagccg
gaggcggtgtcccgagacgacggcctgcgcctgctgggagcccggatcaccgccccggtg
aagtgcgccccgccggacaacgcgccgaccccggccgagcgcgacacctgccgcccgtgg
ctggagcgcgagctgaccctgctgcgcccgacgctgcgcgcggtggtggtcctgggcggc
ttcggctggcagtccctgctgcccgccctggccgcccactggaccgtcccgagaccccgc
ccccgcttcacccacggcgcccgcgtggaactgcccgcgtcggacgacggccccccgctg
gtcctgcacggctgctaccacgtgagccgccgcaacacccagaccggcctgctgaccacg
gagatggtggaggaggtcctgtcccgcgcgaaggccgacgcggggctgtga
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