Actinosynnema mirum: Amir_7079
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Entry
Amir_7079 CDS
T00957
Name
(GenBank) polynucleotide adenylyltransferase/metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ami
Actinosynnema mirum
Pathway
ami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amir_7079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ami03019
]
Amir_7079
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Amir_7079
Messenger RNA biogenesis [BR:
ami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Amir_7079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ACU40869
UniProt:
C6WSJ9
LinkDB
All DBs
Position
complement(8225881..8227389)
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AA seq
502 aa
AA seq
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MELLSDLPVADELAARFAEAGHRLYLVGGSVRDALLGRSSGGDFDLDFTTDARPEQIQRL
LSGWADGLWDTGIAFGTVGATKHGRTVEITTFRADSYDGVTRNPEVTFGDTVEGDLVRRD
FTVNAMAFDVAARELIDPTGGREALAAMVLDTPATPQQSFGDDPLRMLRAARFVSQIGFT
PADRVVEAMTAMAGELERITPERVQQELSKLLCGAHPRRGVELFESTGLAAVVLPELPAM
RLEIDEHHQHKDVFDHSLVVLQQAIDLEDEDNSPDLVLRLAALLHDIGKPGTRRFESGGG
VSFHHHEVLGAKMVRKRLRALRYSKEVVEEVAQLVYLHLRFHGYGNGEWTDSAVRRYATD
AGPLLSRLHKLVRADCTTRNKRKANALQRTYDGLEERIDRLAAEEDLRRVRPDLDGNEIM
RLLGLPPGPQVGRAWKFLKELRLDRGPLDRDEAEVELLAWARAEGIGSVGSQAAAGAAWA
SGGAAAEGVPEGADSAGAPEVE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgctcagcgacctccccgtggccgacgagctcgccgcccgcttcgccgaagcg
gggcaccggctgtacctcgtcggcgggagcgtgcgcgacgcgctgctcgggcggtcgtcc
gggggtgacttcgacctggacttcaccaccgacgcgcgaccggagcagatccagcggctg
ctgtccggctgggccgacgggctgtgggacaccggcatcgcgttcggcacggtcggcgcg
accaagcacggccggaccgtcgagatcacgaccttccgcgcggactcctacgacggggtg
acccgcaaccccgaggtgaccttcggcgacaccgtcgagggcgacctggtccggcgcgac
ttcacggtcaacgcgatggcgttcgacgtggcggcccgcgagctgatcgacccgaccggc
ggtcgcgaggcgctcgccgcgatggtgctggacacgcccgcgacgccgcagcagtcgttc
ggcgacgacccgctgcggatgctgcgcgcggcccggttcgtgtcgcagatcgggttcacg
cccgccgaccgggtggtcgaggcgatgaccgccatggcgggcgagctggagcggatcacg
ccggagcgggtgcagcaggagctgtcgaagctgctgtgcggcgcgcacccgaggcgcggc
gtcgagctgttcgagtccaccgggctcgcggccgtggtgctgcccgagctgcccgcgatg
cggctggagatcgacgagcaccaccagcacaaggacgtgttcgaccactcgctggtcgtg
ctccagcaggcgatcgacctggaggacgaggacaactcccccgacctggtgctgcggctc
gcggcgctgctgcacgacatcggcaagccggggacgcggcggttcgagtccggcggcggc
gtctcgttccaccaccacgaggtgctgggcgcgaagatggtgcgcaagcgcttgcgggcg
ctgcggtactccaaggaggtcgtggaggaggtcgcccagctggtgtacctccacctgcgg
ttccacgggtacggcaacggcgagtggaccgactcggcggtgcgccgctacgccaccgac
gcgggtccgctgctgagcaggctgcacaagctcgtgcgggccgactgcaccacgcgcaac
aagcgcaaggcgaacgccctccagcgcacgtacgacggccttgaggagcggatcgaccgg
ctggccgccgaggaggacctgcgccgggtgcgtcctgacctggacggcaacgagatcatg
cggctgctcgggctgccgccggggccgcaggtcgggcgggcgtggaagttcctcaaggag
ctgcggctggaccgggggccgctggaccgcgacgaggccgaggtggagctgctggcctgg
gcgcgcgccgagggcatcgggtcggtgggatcccaggccgctgccggagcggcctgggcg
tccggtggggcggcggccgagggggtgcccgaaggggctgactccgcgggcgctcccgag
gtcgagtag
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