Acropora millepora: 114955039
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Entry
114955039 CDS
T06134
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
amil
Acropora millepora
Pathway
amil03022
Basal transcription factors
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114955039
09124 Replication and repair
03420 Nucleotide excision repair
114955039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114955039
03400 DNA repair and recombination proteins [BR:
amil03400
]
114955039
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114955039
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114955039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
C1_2
Motif
Other DBs
NCBI-GeneID:
114955039
NCBI-ProteinID:
XP_029187620
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MCISKMANEEEGGYRWLSQYERTWEVIQEDAEGSLQTVVDEISHRSKRRRIMGRSGNIRL
GMMRHLFIVVDMSRAMEEADLKPSRLACSVKLLEDFISEYFDQNPISQVGLIVTRNKRAE
KITELSGNPQLHIGCLQKAASKACTGEPSLQNAIDSAVRSLRHMPGHASREILILFGSLT
SCDPGDIQETVQTLQRQNIRCSIIGLAAEVRVCRTICSETQGSYGVILDERHYRDLLMQH
VVPPVAKADTEAALIRMGFPQHLSSGPPSMCMCHLDDSGGVKGFGTSGYFCPQCKSKYCD
LPVECKVCGLTLVSAPHLARSYQHLFPLAQFTEIDLTVVEYEQHQSPRLCFACRRELTEK
VAYSCPQCGQVFCVDCDIFIHDSLHSCPGCTVAPQGEG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatatccaagatggctaacgaagaggaaggaggatatcgttggctaagtcagtat
gaaaggacttgggaggttatccaagaggatgcagaaggatcccttcaaacagtggttgat
gaaatatcacacagatccaaaagaagaagaatcatgggaagaagtgggaatattcgactt
gggatgatgcgtcatttgtttattgttgtggatatgtcgcgagccatggaagaagctgac
ctcaaaccttctcgtcttgcttgttctgtcaagctgttggaagacttcatctctgagtac
tttgatcaaaatccaatttcacaggttggacttattgtaaccaggaacaagagagctgag
aaaattactgaactaagtgggaacccacagctccacattggctgccttcagaaagctgct
agcaaagcgtgtacaggggaaccctctttacaaaatgcaattgattctgctgttcggtca
ctacgacacatgcctggtcatgccagtcgagaaatactcattctgtttggtagtctaacc
tcgtgcgatccaggagacattcaggagacggttcagacccttcaacgacaaaacatcagg
tgttccataattggcctggcagctgaagtgcgagtttgtagaactatttgttctgaaacg
caaggtagttatggcgtgattttagatgaaagacactaccgagacttgttaatgcaacac
gttgtacctcctgtggccaaagccgacacggaagctgcactaatacgaatgggattccct
cagcatctttcaagcggtccaccatccatgtgcatgtgtcatttggatgacagtggaggt
gtaaaaggtttcggaacgtcgggctacttttgtcctcagtgtaaaagcaagtactgcgat
ttacctgtagaatgtaaagtttgtggtctaacattagtatcggctcctcatctcgctcgc
tcatatcagcatctcttcccgctagctcagtttacagaaatagatttgacagttgtggag
tatgaacagcaccaaagtccaagactttgcttcgcttgtcgcagagaattgacggaaaaa
gtcgcttactcgtgtccacagtgtgggcaagtcttttgtgtagactgtgacatcttcatt
cacgactctcttcacagctgccctggttgcaccgtggccccacaaggagagggttag
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